Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP4Q99727 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP4Q99727 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP4Q99727 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TIMP4Q99727 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP4Q99727 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TIMP4Q99727 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.53■□□□□ 0.72
TIMP4Q99727 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
TIMP4Q99727 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TIMP4Q99727 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.53■□□□□ 0.72
TIMP4Q99727 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TIMP4Q99727 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP4Q99727 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP4Q99727 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.52■□□□□ 0.72
TIMP4Q99727 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TIMP4Q99727 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TIMP4Q99727 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP4Q99727 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TIMP4Q99727 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP4Q99727 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.52■□□□□ 0.72
TIMP4Q99727 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TIMP4Q99727 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.52■□□□□ 0.72
TIMP4Q99727 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TIMP4Q99727 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TIMP4Q99727 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TIMP4Q99727 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.52■□□□□ 0.71
TIMP4Q99727 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TIMP4Q99727 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
TIMP4Q99727 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.51■□□□□ 0.71
TIMP4Q99727 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.51■□□□□ 0.71
TIMP4Q99727 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.51■□□□□ 0.71
TIMP4Q99727 IKBKGP1-201ENST00000612193 1073 ntBASIC19.51■□□□□ 0.71
TIMP4Q99727 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TIMP4Q99727 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMP4Q99727 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TIMP4Q99727 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TIMP4Q99727 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TIMP4Q99727 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TIMP4Q99727 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.5■□□□□ 0.71
TIMP4Q99727 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.5■□□□□ 0.71
TIMP4Q99727 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TIMP4Q99727 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TIMP4Q99727 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.49■□□□□ 0.71
TIMP4Q99727 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
TIMP4Q99727 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TIMP4Q99727 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.49■□□□□ 0.71
TIMP4Q99727 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TIMP4Q99727 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.48■□□□□ 0.71
TIMP4Q99727 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TIMP4Q99727 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMP4Q99727 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TIMP4Q99727 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.48■□□□□ 0.71
TIMP4Q99727 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMP4Q99727 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TIMP4Q99727 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.48■□□□□ 0.71
TIMP4Q99727 AC079089.2-201ENST00000531211 1277 ntBASIC19.48■□□□□ 0.71
TIMP4Q99727 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMP4Q99727 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMP4Q99727 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.48■□□□□ 0.71
TIMP4Q99727 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMP4Q99727 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
TIMP4Q99727 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.47■□□□□ 0.71
TIMP4Q99727 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.47■□□□□ 0.71
TIMP4Q99727 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.47■□□□□ 0.71
TIMP4Q99727 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.47■□□□□ 0.71
TIMP4Q99727 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.47■□□□□ 0.71
TIMP4Q99727 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.47■□□□□ 0.71
TIMP4Q99727 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TIMP4Q99727 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.47■□□□□ 0.71
TIMP4Q99727 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TIMP4Q99727 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.47■□□□□ 0.71
TIMP4Q99727 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP4Q99727 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms