Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX18Q96RF0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX18Q96RF0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SNX18Q96RF0 FAM99A-202ENST00000538190 1989 ntBASIC19.28■□□□□ 0.68
SNX18Q96RF0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX18Q96RF0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNX18Q96RF0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX18Q96RF0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX18Q96RF0 DUX4L19-201ENST00000557448 1267 ntBASIC19.27■□□□□ 0.68
SNX18Q96RF0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX18Q96RF0 AC005837.3-201ENST00000612163 286 ntBASIC19.27■□□□□ 0.68
SNX18Q96RF0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.27■□□□□ 0.68
SNX18Q96RF0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX18Q96RF0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX18Q96RF0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SNX18Q96RF0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX18Q96RF0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.27■□□□□ 0.67
SNX18Q96RF0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNX18Q96RF0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
SNX18Q96RF0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX18Q96RF0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX18Q96RF0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX18Q96RF0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
SNX18Q96RF0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX18Q96RF0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX18Q96RF0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX18Q96RF0 AC244015.2-201ENST00000616358 1861 ntBASIC19.26■□□□□ 0.67
SNX18Q96RF0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 AC010141.3-201ENST00000456659 717 ntBASIC19.25■□□□□ 0.67
SNX18Q96RF0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 OR7E47P-201ENST00000546390 1422 ntBASIC19.25■□□□□ 0.67
SNX18Q96RF0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SNX18Q96RF0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX18Q96RF0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX18Q96RF0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
SNX18Q96RF0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNX18Q96RF0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNX18Q96RF0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX18Q96RF0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX18Q96RF0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX18Q96RF0 LINC01521-201ENST00000504184 1943 ntBASIC19.23■□□□□ 0.67
SNX18Q96RF0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX18Q96RF0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX18Q96RF0 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms