Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH15Q96QU1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 OR7E47P-201ENST00000546390 1422 ntBASIC20.91■□□□□ 0.94
PCDH15Q96QU1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH15Q96QU1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH15Q96QU1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDH15Q96QU1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 AC142381.4-202ENST00000563973 229 ntBASIC20.89■□□□□ 0.93
PCDH15Q96QU1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH15Q96QU1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 AL162412.1-201ENST00000567129 965 ntBASIC20.88■□□□□ 0.93
PCDH15Q96QU1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH15Q96QU1 AC010980.2-201ENST00000587099 1412 ntBASIC20.88■□□□□ 0.93
PCDH15Q96QU1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 UNC93B5-201ENST00000530315 699 ntBASIC20.87■□□□□ 0.93
PCDH15Q96QU1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PCDH15Q96QU1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.86■□□□□ 0.93
PCDH15Q96QU1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 AC006058.3-201ENST00000606217 1069 ntBASIC20.86■□□□□ 0.93
PCDH15Q96QU1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 AC008694.1-202ENST00000636953 945 ntBASIC20.86■□□□□ 0.93
PCDH15Q96QU1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDH15Q96QU1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms