Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAFA1Q96PS6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 RARRES2P6-201ENST00000567333 442 ntBASIC17.73■□□□□ 0.43
GAFA1Q96PS6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.73■□□□□ 0.43
GAFA1Q96PS6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 AC026271.2-201ENST00000428091 497 ntBASIC17.72■□□□□ 0.43
GAFA1Q96PS6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 AC087623.3-201ENST00000607047 1098 ntBASIC17.72■□□□□ 0.43
GAFA1Q96PS6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GAFA1Q96PS6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.71■□□□□ 0.43
GAFA1Q96PS6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
GAFA1Q96PS6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GAFA1Q96PS6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L2-201ENST00000561772 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L6-201ENST00000626483 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L1-201ENST00000627662 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L8-201ENST00000629013 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L3-201ENST00000630187 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L7-201ENST00000630678 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DUX4L5-201ENST00000630834 1275 ntBASIC17.7■□□□□ 0.42
GAFA1Q96PS6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.7■□□□□ 0.42
GAFA1Q96PS6 KRT87P-202ENST00000534226 1464 ntBASIC17.69■□□□□ 0.42
GAFA1Q96PS6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GAFA1Q96PS6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.68■□□□□ 0.42
GAFA1Q96PS6 AC034268.1-201ENST00000441047 882 ntBASIC17.68■□□□□ 0.42
GAFA1Q96PS6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms