Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.79■□□□□ 0.6
USP9XQ93008 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.79■□□□□ 0.6
USP9XQ93008 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.79■□□□□ 0.6
USP9XQ93008 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.79■□□□□ 0.6
USP9XQ93008 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.78■□□□□ 0.6
USP9XQ93008 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.78■□□□□ 0.6
USP9XQ93008 EEF1DP3-203ENST00000566025 782 ntBASIC18.78■□□□□ 0.6
USP9XQ93008 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.78■□□□□ 0.6
USP9XQ93008 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
USP9XQ93008 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP9XQ93008 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.77■□□□□ 0.6
USP9XQ93008 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.77■□□□□ 0.6
USP9XQ93008 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.77■□□□□ 0.6
USP9XQ93008 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP9XQ93008 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP9XQ93008 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP9XQ93008 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP9XQ93008 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
USP9XQ93008 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.77■□□□□ 0.59
USP9XQ93008 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.77■□□□□ 0.59
USP9XQ93008 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
USP9XQ93008 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP9XQ93008 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
USP9XQ93008 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.76■□□□□ 0.59
USP9XQ93008 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP9XQ93008 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP9XQ93008 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
USP9XQ93008 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.76■□□□□ 0.59
USP9XQ93008 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.76■□□□□ 0.59
USP9XQ93008 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP9XQ93008 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP9XQ93008 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP9XQ93008 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP9XQ93008 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP9XQ93008 FAM197Y4-202ENST00000622692 608 ntBASIC18.76■□□□□ 0.59
USP9XQ93008 RBM17P2-201ENST00000616397 1405 ntBASIC18.75■□□□□ 0.59
USP9XQ93008 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
USP9XQ93008 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP9XQ93008 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.75■□□□□ 0.59
USP9XQ93008 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP9XQ93008 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
USP9XQ93008 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
USP9XQ93008 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
USP9XQ93008 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
USP9XQ93008 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP9XQ93008 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
USP9XQ93008 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.75■□□□□ 0.59
USP9XQ93008 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.75■□□□□ 0.59
USP9XQ93008 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.75■□□□□ 0.59
USP9XQ93008 AC069544.1-201ENST00000609399 999 ntBASIC18.75■□□□□ 0.59
USP9XQ93008 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP9XQ93008 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP9XQ93008 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.74■□□□□ 0.59
USP9XQ93008 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP9XQ93008 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.74■□□□□ 0.59
USP9XQ93008 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.74■□□□□ 0.59
USP9XQ93008 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP9XQ93008 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.74■□□□□ 0.59
USP9XQ93008 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.74■□□□□ 0.59
USP9XQ93008 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.74■□□□□ 0.59
USP9XQ93008 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 ARMC10P1-201ENST00000313754 855 ntBASIC18.73■□□□□ 0.59
USP9XQ93008 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.73■□□□□ 0.59
USP9XQ93008 TMPOP1-202ENST00000424642 1267 ntBASIC18.73■□□□□ 0.59
USP9XQ93008 PNMA6B-201ENST00000538162 1200 ntBASIC18.73■□□□□ 0.59
USP9XQ93008 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
USP9XQ93008 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.73■□□□□ 0.59
USP9XQ93008 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.73■□□□□ 0.59
USP9XQ93008 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.73■□□□□ 0.59
USP9XQ93008 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
USP9XQ93008 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.73■□□□□ 0.59
USP9XQ93008 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP9XQ93008 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP9XQ93008 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.72■□□□□ 0.59
USP9XQ93008 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP9XQ93008 AL049637.2-201ENST00000641778 930 ntBASIC18.72■□□□□ 0.59
USP9XQ93008 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
USP9XQ93008 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
USP9XQ93008 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP9XQ93008 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.72■□□□□ 0.59
USP9XQ93008 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
USP9XQ93008 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP9XQ93008 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
USP9XQ93008 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms