Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.32■■□□□ 1
SLC44A1Q8WWI5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 SRD5A1P1-201ENST00000442297 786 ntBASIC21.31■■□□□ 1
SLC44A1Q8WWI5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 AP004607.7-201ENST00000527152 1677 ntBASIC21.31■■□□□ 1
SLC44A1Q8WWI5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.31■■□□□ 1
SLC44A1Q8WWI5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC44A1Q8WWI5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 AL512631.2-201ENST00000604634 923 ntBASIC21.29■■□□□ 1
SLC44A1Q8WWI5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC44A1Q8WWI5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 LINC01006-201ENST00000333319 2292 ntBASIC21.28■■□□□ 1
SLC44A1Q8WWI5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC44A1Q8WWI5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 FEM1AP1-201ENST00000431297 1995 ntBASIC21.27■■□□□ 1
SLC44A1Q8WWI5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC44A1Q8WWI5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SLC44A1Q8WWI5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC44A1Q8WWI5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC44A1Q8WWI5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC44A1Q8WWI5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SLC44A1Q8WWI5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC44A1Q8WWI5 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms