Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 TPRG1LP1-201ENST00000598702 760 ntBASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 AC055733.4-201ENST00000638462 1354 ntBASIC17.79■□□□□ 0.44
ZNRF1Q8ND25 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ZNRF1Q8ND25 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ZNRF1Q8ND25 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ZNRF1Q8ND25 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ZNRF1Q8ND25 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
ZNRF1Q8ND25 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNRF1Q8ND25 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 YBX1P1-201ENST00000445822 960 ntBASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNRF1Q8ND25 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 LINC02228-203ENST00000641970 1355 ntBASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNRF1Q8ND25 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 AC104564.3-201ENST00000582367 638 ntBASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNRF1Q8ND25 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms