Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TTC9BQ8N6N2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 AL109923.1-201ENST00000618799 583 ntBASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 AC010536.3-201ENST00000620306 533 ntBASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC9BQ8N6N2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 AC003102.1-202ENST00000563394 1796 ntBASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 KRT18P20-201ENST00000548986 1279 ntBASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 AC092053.2-201ENST00000640557 1818 ntBASIC22.41■■□□□ 1.18
TTC9BQ8N6N2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 AL355802.2-201ENST00000402069 882 ntBASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 AC007322.1-201ENST00000426983 750 ntBASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 AC005181.1-201ENST00000604782 1256 ntBASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 AC231657.2-201ENST00000624556 255 ntBASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC9BQ8N6N2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.39■■□□□ 1.18
TTC9BQ8N6N2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC9BQ8N6N2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC9BQ8N6N2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC9BQ8N6N2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms