Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC104564.3-201ENST00000582367 638 ntBASIC20.74■□□□□ 0.91
CPSF7Q8N684 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.74■□□□□ 0.91
CPSF7Q8N684 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.74■□□□□ 0.91
CPSF7Q8N684 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPSF7Q8N684 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 SYT6-210ENST00000641643 1587 ntBASIC20.73■□□□□ 0.91
CPSF7Q8N684 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 AC079089.2-201ENST00000531211 1277 ntBASIC20.73■□□□□ 0.91
CPSF7Q8N684 DUX4L19-201ENST00000557448 1267 ntBASIC20.73■□□□□ 0.91
CPSF7Q8N684 AL031432.3-201ENST00000607698 485 ntBASIC20.73■□□□□ 0.91
CPSF7Q8N684 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CPSF7Q8N684 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF7Q8N684 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 AC099791.2-201ENST00000605725 427 ntBASIC20.72■□□□□ 0.91
CPSF7Q8N684 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF7Q8N684 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
CPSF7Q8N684 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF7Q8N684 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF7Q8N684 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF7Q8N684 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.71■□□□□ 0.91
CPSF7Q8N684 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CPSF7Q8N684 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF7Q8N684 AC092171.4-201ENST00000609130 632 ntBASIC20.71■□□□□ 0.91
CPSF7Q8N684 AL031602.1-201ENST00000633169 911 ntBASIC20.71■□□□□ 0.91
CPSF7Q8N684 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.71■□□□□ 0.91
CPSF7Q8N684 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.71■□□□□ 0.91
CPSF7Q8N684 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF7Q8N684 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.71■□□□□ 0.91
CPSF7Q8N684 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPSF7Q8N684 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF7Q8N684 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.91
CPSF7Q8N684 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.91
CPSF7Q8N684 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.7■□□□□ 0.9
CPSF7Q8N684 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF7Q8N684 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF7Q8N684 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF7Q8N684 EDA-201ENST00000338901 1233 ntBASIC20.7■□□□□ 0.9
CPSF7Q8N684 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CPSF7Q8N684 SUDS3P1-201ENST00000505831 966 ntBASIC20.7■□□□□ 0.9
CPSF7Q8N684 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF7Q8N684 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.7■□□□□ 0.9
CPSF7Q8N684 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF7Q8N684 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.7■□□□□ 0.9
CPSF7Q8N684 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 AL355001.2-201ENST00000620617 1191 ntBASIC20.69■□□□□ 0.9
CPSF7Q8N684 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CPSF7Q8N684 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF7Q8N684 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF7Q8N684 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF7Q8N684 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF7Q8N684 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CPSF7Q8N684 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF7Q8N684 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CPSF7Q8N684 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF7Q8N684 SERBP1P1-201ENST00000396021 1160 ntBASIC20.68■□□□□ 0.9
CPSF7Q8N684 ZNRF2P3-201ENST00000424200 374 ntBASIC20.68■□□□□ 0.9
CPSF7Q8N684 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.68■□□□□ 0.9
CPSF7Q8N684 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF7Q8N684 OXCT2P1-201ENST00000447263 1535 ntBASIC20.68■□□□□ 0.9
CPSF7Q8N684 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CPSF7Q8N684 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF7Q8N684 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms