Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00528Q8N1L1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00528Q8N1L1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00528Q8N1L1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00528Q8N1L1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 AC080038.3-201ENST00000623346 1952 ntBASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 FBXW4P1-201ENST00000426721 2239 ntBASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 Z97985.1-201ENST00000332270 946 ntBASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 ID1-201ENST00000376105 1233 ntBASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 OR2I1P-207ENST00000453522 948 ntBASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 AC010525.1-201ENST00000585559 441 ntBASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00528Q8N1L1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 AL499627.2-201ENST00000606283 725 ntBASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00528Q8N1L1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 TERF1P2-201ENST00000583350 1212 ntBASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 AL136370.1-201ENST00000608166 691 ntBASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00528Q8N1L1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00528Q8N1L1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 AL603841.1-201ENST00000430516 664 ntBASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00528Q8N1L1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms