Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 AC099791.1-201ENST00000416440 715 ntBASIC19.66■□□□□ 0.74
VRK2Q86Y07 IGHV3-19-201ENST00000521488 291 ntBASIC19.66■□□□□ 0.74
VRK2Q86Y07 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VRK2Q86Y07 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.66■□□□□ 0.74
VRK2Q86Y07 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VRK2Q86Y07 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.65■□□□□ 0.74
VRK2Q86Y07 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.65■□□□□ 0.74
VRK2Q86Y07 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 AP006587.3-201ENST00000525742 1516 ntBASIC19.65■□□□□ 0.74
VRK2Q86Y07 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VRK2Q86Y07 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.65■□□□□ 0.74
VRK2Q86Y07 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VRK2Q86Y07 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.64■□□□□ 0.74
VRK2Q86Y07 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VRK2Q86Y07 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VRK2Q86Y07 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VRK2Q86Y07 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VRK2Q86Y07 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
VRK2Q86Y07 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.64■□□□□ 0.73
VRK2Q86Y07 AC106739.1-201ENST00000617035 715 ntBASIC19.64■□□□□ 0.73
VRK2Q86Y07 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VRK2Q86Y07 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.64■□□□□ 0.73
VRK2Q86Y07 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VRK2Q86Y07 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK2Q86Y07 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.63■□□□□ 0.73
VRK2Q86Y07 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.63■□□□□ 0.73
VRK2Q86Y07 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK2Q86Y07 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.63■□□□□ 0.73
VRK2Q86Y07 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.63■□□□□ 0.73
VRK2Q86Y07 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.63■□□□□ 0.73
VRK2Q86Y07 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.63■□□□□ 0.73
VRK2Q86Y07 AC110285.6-201ENST00000617652 491 ntBASIC19.63■□□□□ 0.73
VRK2Q86Y07 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK2Q86Y07 AL024507.2-201ENST00000606070 2574 ntBASIC19.63■□□□□ 0.73
VRK2Q86Y07 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
VRK2Q86Y07 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK2Q86Y07 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
VRK2Q86Y07 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK2Q86Y07 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK2Q86Y07 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VRK2Q86Y07 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.62■□□□□ 0.73
VRK2Q86Y07 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.62■□□□□ 0.73
VRK2Q86Y07 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VRK2Q86Y07 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VRK2Q86Y07 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 TSPY26P-201ENST00000476365 1326 ntBASIC19.61■□□□□ 0.73
VRK2Q86Y07 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 AP001330.3-201ENST00000520123 633 ntBASIC19.61■□□□□ 0.73
VRK2Q86Y07 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 AC027682.1-201ENST00000562846 899 ntBASIC19.61■□□□□ 0.73
VRK2Q86Y07 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VRK2Q86Y07 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VRK2Q86Y07 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VRK2Q86Y07 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VRK2Q86Y07 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK2Q86Y07 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VRK2Q86Y07 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms