Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TMC4Q7Z404 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
TMC4Q7Z404 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMC4Q7Z404 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TMC4Q7Z404 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TMC4Q7Z404 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.16■■□□□ 1.78
TMC4Q7Z404 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
TMC4Q7Z404 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.16■■□□□ 1.78
TMC4Q7Z404 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.16■■□□□ 1.78
TMC4Q7Z404 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
TMC4Q7Z404 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMC4Q7Z404 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.15■■□□□ 1.78
TMC4Q7Z404 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
TMC4Q7Z404 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMC4Q7Z404 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.15■■□□□ 1.78
TMC4Q7Z404 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMC4Q7Z404 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMC4Q7Z404 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.15■■□□□ 1.78
TMC4Q7Z404 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.15■■□□□ 1.78
TMC4Q7Z404 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.15■■□□□ 1.78
TMC4Q7Z404 AL591742.1-201ENST00000604433 565 ntBASIC26.15■■□□□ 1.78
TMC4Q7Z404 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMC4Q7Z404 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMC4Q7Z404 RBM17P2-201ENST00000616397 1405 ntBASIC26.14■■□□□ 1.78
TMC4Q7Z404 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
TMC4Q7Z404 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.14■■□□□ 1.78
TMC4Q7Z404 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TMC4Q7Z404 BX276092.2-201ENST00000417668 665 ntBASIC26.14■■□□□ 1.78
TMC4Q7Z404 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.14■■□□□ 1.78
TMC4Q7Z404 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.14■■□□□ 1.78
TMC4Q7Z404 AC008687.6-201ENST00000596318 630 ntBASIC26.14■■□□□ 1.78
TMC4Q7Z404 MYC-209ENST00000641252 345 ntBASIC26.14■■□□□ 1.78
TMC4Q7Z404 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.14■■□□□ 1.78
TMC4Q7Z404 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
TMC4Q7Z404 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
TMC4Q7Z404 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMC4Q7Z404 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TMC4Q7Z404 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMC4Q7Z404 KRT18P29-201ENST00000397031 1267 ntBASIC26.13■■□□□ 1.77
TMC4Q7Z404 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.13■■□□□ 1.77
TMC4Q7Z404 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.13■■□□□ 1.77
TMC4Q7Z404 AC087742.1-201ENST00000575880 1738 ntBASIC26.13■■□□□ 1.77
TMC4Q7Z404 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.12■■□□□ 1.77
TMC4Q7Z404 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.12■■□□□ 1.77
TMC4Q7Z404 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.12■■□□□ 1.77
TMC4Q7Z404 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.12■■□□□ 1.77
TMC4Q7Z404 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.12■■□□□ 1.77
TMC4Q7Z404 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
TMC4Q7Z404 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TMC4Q7Z404 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.11■■□□□ 1.77
TMC4Q7Z404 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMC4Q7Z404 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMC4Q7Z404 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.11■■□□□ 1.77
TMC4Q7Z404 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMC4Q7Z404 AC097658.1-201ENST00000475555 843 ntBASIC26.11■■□□□ 1.77
TMC4Q7Z404 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMC4Q7Z404 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
TMC4Q7Z404 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TMC4Q7Z404 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMC4Q7Z404 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.11■■□□□ 1.77
TMC4Q7Z404 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMC4Q7Z404 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMC4Q7Z404 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMC4Q7Z404 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.1■■□□□ 1.77
TMC4Q7Z404 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.1■■□□□ 1.77
TMC4Q7Z404 AC083880.1-201ENST00000608266 535 ntBASIC26.1■■□□□ 1.77
TMC4Q7Z404 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
TMC4Q7Z404 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.1■■□□□ 1.77
TMC4Q7Z404 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMC4Q7Z404 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMC4Q7Z404 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMC4Q7Z404 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 RARRES2P4-201ENST00000514074 484 ntBASIC26.09■■□□□ 1.77
TMC4Q7Z404 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
TMC4Q7Z404 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMC4Q7Z404 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.08■■□□□ 1.77
TMC4Q7Z404 AC010980.2-201ENST00000587099 1412 ntBASIC26.08■■□□□ 1.77
TMC4Q7Z404 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMC4Q7Z404 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms