Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC241585.3-202ENST00000628937 1088 ntBASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 AC245100.8-202ENST00000629247 1058 ntBASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 AC104564.3-201ENST00000582367 638 ntBASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PTCHD4Q6ZW05 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCHD4Q6ZW05 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 AL356740.2-201ENST00000601559 647 ntBASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 AC099791.2-201ENST00000605725 427 ntBASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 AC026471.6-201ENST00000622954 1905 ntBASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCHD4Q6ZW05 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 AC133637.1-201ENST00000624115 1537 ntBASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 MIR3621-201ENST00000580529 85 ntBASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 pRNA.6-201ENST00000610482 90 ntBASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 pRNA.5-201ENST00000612139 90 ntBASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 pRNA.11-201ENST00000618423 90 ntBASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 pRNA.13-201ENST00000619112 90 ntBASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PTCHD4Q6ZW05 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms