Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST2H2AA3Q6FI13 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.55■□□□□ 0.88
HIST2H2AA3Q6FI13 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST2H2AA3Q6FI13 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HIST2H2AA3Q6FI13 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST2H2AA3Q6FI13 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST2H2AA3Q6FI13 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 AC026471.6-201ENST00000622954 1905 ntBASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST2H2AA3Q6FI13 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 AP006587.3-201ENST00000525742 1516 ntBASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 BX005040.4-201ENST00000637145 1518 ntBASIC20.53■□□□□ 0.88
HIST2H2AA3Q6FI13 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST2H2AA3Q6FI13 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HIST2H2AA3Q6FI13 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.52■□□□□ 0.87
HIST2H2AA3Q6FI13 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 MIR638-201ENST00000385237 100 ntBASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST2H2AA3Q6FI13 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 AL354811.1-201ENST00000610286 706 ntBASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.5■□□□□ 0.87
HIST2H2AA3Q6FI13 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.49■□□□□ 0.87
HIST2H2AA3Q6FI13 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 IRS3P-201ENST00000223076 1006 ntBASIC20.48■□□□□ 0.87
HIST2H2AA3Q6FI13 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms