Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LIN9Q5TKA1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 KRT19P1-201ENST00000405746 1186 ntBASIC23.06■■□□□ 1.28
LIN9Q5TKA1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 OXCT2P1-201ENST00000447263 1535 ntBASIC23.06■■□□□ 1.28
LIN9Q5TKA1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LIN9Q5TKA1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIN9Q5TKA1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.04■■□□□ 1.28
LIN9Q5TKA1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 BID-214ENST00000617586 542 ntTSL 5 BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.03■■□□□ 1.28
LIN9Q5TKA1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 HLA-L-209ENST00000420110 1011 ntBASIC23.02■■□□□ 1.28
LIN9Q5TKA1 AC079140.4-201ENST00000507448 529 ntBASIC23.02■■□□□ 1.28
LIN9Q5TKA1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIN9Q5TKA1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
LIN9Q5TKA1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 AC073111.5-205ENST00000641717 521 ntBASIC23.01■■□□□ 1.27
LIN9Q5TKA1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.01■■□□□ 1.27
LIN9Q5TKA1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms