Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBR4Q5T4S7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
UBR4Q5T4S7 ABCB10P1-201ENST00000614297 2181 ntBASIC11.87□□□□□ -0.51
UBR4Q5T4S7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 KRT17P3-201ENST00000420566 1262 ntBASIC11.87□□□□□ -0.51
UBR4Q5T4S7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 AC010141.2-201ENST00000452426 721 ntBASIC11.87□□□□□ -0.51
UBR4Q5T4S7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 AC006011.2-201ENST00000621313 1158 ntBASIC11.87□□□□□ -0.51
UBR4Q5T4S7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBR4Q5T4S7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 AC005224.4-201ENST00000583262 1652 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 FDX1P1-201ENST00000449115 551 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 WWOX-216ENST00000569818 525 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 AL355472.2-201ENST00000422958 438 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 PNMA6B-201ENST00000538162 1200 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 RARRES2P10-201ENST00000564312 460 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 AC113410.3-201ENST00000623366 203 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 HLA-B-256ENST00000639848 1089 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 CLEC4GP1-201ENST00000596555 870 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 AL355385.1-201ENST00000606123 409 ntBASIC11.86□□□□□ -0.51
UBR4Q5T4S7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBR4Q5T4S7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBR4Q5T4S7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms