Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 MTDHP2-201ENST00000601468 714 ntBASIC18.93■□□□□ 0.62
CCDC58Q4VC31 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC58Q4VC31 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC58Q4VC31 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 Z92544.1-202ENST00000571933 1220 ntBASIC18.91■□□□□ 0.62
CCDC58Q4VC31 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 AL020996.1-203ENST00000536896 2307 ntBASIC18.91■□□□□ 0.62
CCDC58Q4VC31 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC58Q4VC31 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 KRT125P-201ENST00000546827 989 ntBASIC18.9■□□□□ 0.62
CCDC58Q4VC31 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 OR7E47P-201ENST00000546390 1422 ntBASIC18.9■□□□□ 0.62
CCDC58Q4VC31 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC58Q4VC31 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC58Q4VC31 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC58Q4VC31 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC58Q4VC31 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC58Q4VC31 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC58Q4VC31 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 AC241377.3-202ENST00000626088 1088 ntBASIC18.89■□□□□ 0.61
CCDC58Q4VC31 AC241585.3-202ENST00000628937 1088 ntBASIC18.89■□□□□ 0.61
CCDC58Q4VC31 AC245100.8-202ENST00000629247 1058 ntBASIC18.89■□□□□ 0.61
CCDC58Q4VC31 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC58Q4VC31 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC58Q4VC31 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC58Q4VC31 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC58Q4VC31 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms