Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM60Q495X7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM60Q495X7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM60Q495X7 LINC01960-201ENST00000563759 1884 ntBASIC23.56■■□□□ 1.36
TRIM60Q495X7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 AC120498.10-201ENST00000621827 505 ntBASIC23.55■■□□□ 1.36
TRIM60Q495X7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 OR7E47P-201ENST00000546390 1422 ntBASIC23.55■■□□□ 1.36
TRIM60Q495X7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM60Q495X7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM60Q495X7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 AP006587.3-201ENST00000525742 1516 ntBASIC23.54■■□□□ 1.36
TRIM60Q495X7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
TRIM60Q495X7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM60Q495X7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
TRIM60Q495X7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM60Q495X7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM60Q495X7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM60Q495X7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
TRIM60Q495X7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM60Q495X7 AL034346.1-201ENST00000568244 1277 ntBASIC23.53■■□□□ 1.36
TRIM60Q495X7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM60Q495X7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TRIM60Q495X7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM60Q495X7 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.52■■□□□ 1.36
TRIM60Q495X7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM60Q495X7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM60Q495X7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM60Q495X7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM60Q495X7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.52■■□□□ 1.36
TRIM60Q495X7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRIM60Q495X7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
TRIM60Q495X7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TRIM60Q495X7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TRIM60Q495X7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
TRIM60Q495X7 AL591742.1-201ENST00000604433 565 ntBASIC23.51■■□□□ 1.35
TRIM60Q495X7 AC008175.2-201ENST00000612840 297 ntBASIC23.51■■□□□ 1.35
TRIM60Q495X7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM60Q495X7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM60Q495X7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM60Q495X7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM60Q495X7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM60Q495X7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM60Q495X7 AL162412.1-201ENST00000567129 965 ntBASIC23.5■■□□□ 1.35
TRIM60Q495X7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.5■■□□□ 1.35
TRIM60Q495X7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM60Q495X7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM60Q495X7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM60Q495X7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM60Q495X7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM60Q495X7 UBE2SP1-201ENST00000450587 669 ntBASIC23.49■■□□□ 1.35
TRIM60Q495X7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 AL359736.2-201ENST00000621992 437 ntBASIC23.49■■□□□ 1.35
TRIM60Q495X7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM60Q495X7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TRIM60Q495X7 RBM17P2-201ENST00000616397 1405 ntBASIC23.49■■□□□ 1.35
TRIM60Q495X7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms