Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 YCR024C-BYCR024C-B 267 nt3.14□□□□□ -1.91
DDC1Q08949 IZH1YDR492W 951 nt3.14□□□□□ -1.91
DDC1Q08949 APA2YDR530C 978 nt3.14□□□□□ -1.91
DDC1Q08949 USE1YGL098W 738 nt3.14□□□□□ -1.91
DDC1Q08949 ARI1YGL157W 1044 nt3.14□□□□□ -1.91
DDC1Q08949 SAW1YAL027W 786 nt3.14□□□□□ -1.91
DDC1Q08949 RNH203YLR154C 333 nt3.14□□□□□ -1.91
DDC1Q08949 YMR310CYMR310C 954 nt3.14□□□□□ -1.91
DDC1Q08949 YNL035CYNL035C 1170 nt3.14□□□□□ -1.91
DDC1Q08949 RRG9YNL213C 645 nt3.14□□□□□ -1.91
DDC1Q08949 SUR1YPL057C 1149 nt3.14□□□□□ -1.91
DDC1Q08949 ATG5YPL149W 885 nt3.14□□□□□ -1.91
DDC1Q08949 SPP381YBR152W 876 nt3.14□□□□□ -1.91
DDC1Q08949 MAL12YGR292W 1755 nt3.14□□□□□ -1.91
DDC1Q08949 MAL32YBR299W 1755 nt3.14□□□□□ -1.91
DDC1Q08949 SPO14YKR031C 5052 nt3.14□□□□□ -1.91
DDC1Q08949 CHO2YGR157W 2610 nt3.14□□□□□ -1.91
DDC1Q08949 CET1YPL228W 1650 nt3.14□□□□□ -1.91
DDC1Q08949 PDS1YDR113C 1122 nt3.13□□□□□ -1.91
DDC1Q08949 DLS1YJL065C 504 nt3.13□□□□□ -1.91
DDC1Q08949 RPC37YKR025W 849 nt3.13□□□□□ -1.91
DDC1Q08949 RPL8BYLL045C 771 nt3.13□□□□□ -1.91
DDC1Q08949 TEM1YML064C 738 nt3.13□□□□□ -1.91
DDC1Q08949 YML090WYML090W 387 nt3.13□□□□□ -1.91
DDC1Q08949 YIP3YNL044W 531 nt3.13□□□□□ -1.91
DDC1Q08949 YBL065WYBL065W 345 nt3.13□□□□□ -1.91
DDC1Q08949 YNL171CYNL171C 369 nt3.13□□□□□ -1.91
DDC1Q08949 ATG19YOL082W 1248 nt3.13□□□□□ -1.91
DDC1Q08949 ATG29YPL166W 642 nt3.13□□□□□ -1.91
DDC1Q08949 YBR089WYBR089W 600 nt3.13□□□□□ -1.91
DDC1Q08949 ARA1YBR149W 1035 nt3.13□□□□□ -1.91
DDC1Q08949 ISM1YPL040C 3009 nt3.13□□□□□ -1.91
DDC1Q08949 TFB2YPL122C 1542 nt3.13□□□□□ -1.91
DDC1Q08949 MSS4YDR208W 2340 nt3.13□□□□□ -1.91
DDC1Q08949 BCH1YMR237W 2175 nt3.12□□□□□ -1.91
DDC1Q08949 TMA108YIL137C 2841 nt3.12□□□□□ -1.91
DDC1Q08949 TOP1YOL006C 2310 nt3.12□□□□□ -1.91
DDC1Q08949 TLG1YDR468C 675 nt3.12□□□□□ -1.91
DDC1Q08949 RPS21BYJL136C 264 nt3.12□□□□□ -1.91
DDC1Q08949 YJR071WYJR071W 369 nt3.12□□□□□ -1.91
DDC1Q08949 YKL033W-AYKL033W-A 711 nt3.12□□□□□ -1.91
DDC1Q08949 PIR1YKL164C 1026 nt3.12□□□□□ -1.91
DDC1Q08949 RIM9YMR063W 720 nt3.12□□□□□ -1.91
DDC1Q08949 IZH4YOL101C 939 nt3.12□□□□□ -1.91
DDC1Q08949 RIB5YBR256C 717 nt3.12□□□□□ -1.91
DDC1Q08949 YLR446WYLR446W 1302 nt3.12□□□□□ -1.91
DDC1Q08949 KAR1YNL188W 1302 nt3.12□□□□□ -1.91
DDC1Q08949 ROG1YGL144C 2058 nt3.12□□□□□ -1.91
DDC1Q08949 YME2YMR302C 2553 nt3.11□□□□□ -1.91
DDC1Q08949 FLO5YHR211W 3228 nt3.11□□□□□ -1.91
DDC1Q08949 SKP2YNL311C 2292 nt3.11□□□□□ -1.91
DDC1Q08949 MRH1YDR033W 963 nt3.11□□□□□ -1.91
DDC1Q08949 AML1YGR001C 747 nt3.11□□□□□ -1.91
DDC1Q08949 YIL102C-AYIL102C-A 228 nt3.11□□□□□ -1.91
DDC1Q08949 YIL156W-AYIL156W-A 402 nt3.11□□□□□ -1.91
DDC1Q08949 FIP1YJR093C 984 nt3.11□□□□□ -1.91
DDC1Q08949 YLR154C-HYLR154C-H 132 nt3.11□□□□□ -1.91
DDC1Q08949 YLR156C-AYLR156C-A 132 nt3.11□□□□□ -1.91
DDC1Q08949 YLR157C-CYLR157C-C 132 nt3.11□□□□□ -1.91
DDC1Q08949 YLR159C-AYLR159C-A 132 nt3.11□□□□□ -1.91
DDC1Q08949 COQ9YLR201C 783 nt3.11□□□□□ -1.91
DDC1Q08949 YMR294W-AYMR294W-A 360 nt3.11□□□□□ -1.91
DDC1Q08949 RUF5-1RUF5-1 710 nt3.11□□□□□ -1.91
DDC1Q08949 RUF5-2RUF5-2 710 nt3.11□□□□□ -1.91
DDC1Q08949 YPR078CYPR078C 1119 nt3.11□□□□□ -1.91
DDC1Q08949 YPR136CYPR136C 513 nt3.11□□□□□ -1.91
DDC1Q08949 MRPL27YBR282W 441 nt3.11□□□□□ -1.91
DDC1Q08949 RRP14YKL082C 1305 nt3.11□□□□□ -1.91
DDC1Q08949 SPO71YDR104C 3738 nt3.11□□□□□ -1.91
DDC1Q08949 YDL180WYDL180W 1644 nt3.11□□□□□ -1.91
DDC1Q08949 LCB4YOR171C 1875 nt3.1□□□□□ -1.91
DDC1Q08949 NHP10YDL002C 612 nt3.1□□□□□ -1.91
DDC1Q08949 RPS29BYDL061C 171 nt3.1□□□□□ -1.91
DDC1Q08949 TCA17YEL048C 459 nt3.1□□□□□ -1.91
DDC1Q08949 YER165C-AYER165C-A 357 nt3.1□□□□□ -1.91
DDC1Q08949 YJR128WYJR128W 360 nt3.1□□□□□ -1.91
DDC1Q08949 ARC19YKL013C 516 nt3.1□□□□□ -1.91
DDC1Q08949 CSM3YMR048W 954 nt3.1□□□□□ -1.91
DDC1Q08949 SYC1YOR179C 567 nt3.1□□□□□ -1.91
DDC1Q08949 HNT3YOR258W 654 nt3.1□□□□□ -1.91
DDC1Q08949 MRP2YPR166C 348 nt3.1□□□□□ -1.91
DDC1Q08949 POL3YDL102W 3294 nt3.1□□□□□ -1.91
DDC1Q08949 YDR089WYDR089W 2610 nt3.1□□□□□ -1.91
DDC1Q08949 GIS4YML006C 2325 nt3.1□□□□□ -1.91
DDC1Q08949 YKL222CYKL222C 2118 nt3.1□□□□□ -1.91
DDC1Q08949 STP2YHR006W 1626 nt3.09□□□□□ -1.91
DDC1Q08949 MRPL32YCR003W 552 nt3.09□□□□□ -1.91
DDC1Q08949 YGL006W-AYGL006W-A 111 nt3.09□□□□□ -1.91
DDC1Q08949 LIF1YGL090W 1266 nt3.09□□□□□ -1.91
DDC1Q08949 PPX1YHR201C 1194 nt3.09□□□□□ -1.91
DDC1Q08949 YJR111CYJR111C 852 nt3.09□□□□□ -1.91
DDC1Q08949 YKL162CYKL162C 1209 nt3.09□□□□□ -1.91
DDC1Q08949 RHO5YNL180C 996 nt3.09□□□□□ -1.91
DDC1Q08949 AME1YBR211C 975 nt3.09□□□□□ -1.91
DDC1Q08949 RPN1YHR027C 2982 nt3.09□□□□□ -1.92
DDC1Q08949 EMP70YLR083C 2004 nt3.09□□□□□ -1.92
DDC1Q08949 SIN4YNL236W 2925 nt3.08□□□□□ -1.92
DDC1Q08949 BMH2YDR099W 822 nt3.08□□□□□ -1.92
DDC1Q08949 YDR340WYDR340W 303 nt3.08□□□□□ -1.92
DDC1Q08949 RPL23BYER117W 414 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms