Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
ATP7AQ04656 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
ATP7AQ04656 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
ATP7AQ04656 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
ATP7AQ04656 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC31.99■■■□□ 2.71
ATP7AQ04656 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC31.99■■■□□ 2.71
ATP7AQ04656 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC31.99■■■□□ 2.71
ATP7AQ04656 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC31.99■■■□□ 2.71
ATP7AQ04656 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
ATP7AQ04656 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.99■■■□□ 2.71
ATP7AQ04656 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP7AQ04656 RNF146-206ENST00000480444 843 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP7AQ04656 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP7AQ04656 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP7AQ04656 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP7AQ04656 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC31.97■■■□□ 2.71
ATP7AQ04656 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ATP7AQ04656 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC31.97■■■□□ 2.71
ATP7AQ04656 UNC93B5-201ENST00000530315 699 ntBASIC31.97■■■□□ 2.71
ATP7AQ04656 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.97■■■□□ 2.71
ATP7AQ04656 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP7AQ04656 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP7AQ04656 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
ATP7AQ04656 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP7AQ04656 AC243732.1-201ENST00000612648 864 ntBASIC31.96■■■□□ 2.71
ATP7AQ04656 AC008175.2-201ENST00000612840 297 ntBASIC31.96■■■□□ 2.71
ATP7AQ04656 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
ATP7AQ04656 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP7AQ04656 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC31.96■■■□□ 2.71
ATP7AQ04656 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP7AQ04656 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC31.95■■■□□ 2.71
ATP7AQ04656 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ATP7AQ04656 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.95■■■□□ 2.71
ATP7AQ04656 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
ATP7AQ04656 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
ATP7AQ04656 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.95■■■□□ 2.71
ATP7AQ04656 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.95■■■□□ 2.71
ATP7AQ04656 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC31.95■■■□□ 2.71
ATP7AQ04656 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.95■■■□□ 2.71
ATP7AQ04656 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP7AQ04656 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP7AQ04656 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.95■■■□□ 2.7
ATP7AQ04656 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP7AQ04656 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP7AQ04656 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP7AQ04656 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC31.95■■■□□ 2.7
ATP7AQ04656 AL596275.1-201ENST00000423464 877 ntBASIC31.95■■■□□ 2.7
ATP7AQ04656 AC128676.1-201ENST00000454392 318 ntBASIC31.95■■■□□ 2.7
ATP7AQ04656 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC31.95■■■□□ 2.7
ATP7AQ04656 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP7AQ04656 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP7AQ04656 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.94■■■□□ 2.7
ATP7AQ04656 AP003097.1-201ENST00000530657 1135 ntBASIC31.94■■■□□ 2.7
ATP7AQ04656 AC120498.10-201ENST00000621827 505 ntBASIC31.94■■■□□ 2.7
ATP7AQ04656 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
ATP7AQ04656 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
ATP7AQ04656 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ATP7AQ04656 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.93■■■□□ 2.7
ATP7AQ04656 POU5F1P4-201ENST00000413175 1085 ntBASIC31.93■■■□□ 2.7
ATP7AQ04656 AL158047.1-201ENST00000445918 881 ntBASIC31.93■■■□□ 2.7
ATP7AQ04656 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
ATP7AQ04656 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC31.93■■■□□ 2.7
ATP7AQ04656 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC31.93■■■□□ 2.7
ATP7AQ04656 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ATP7AQ04656 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC31.93■■■□□ 2.7
ATP7AQ04656 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
ATP7AQ04656 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC31.92■■■□□ 2.7
ATP7AQ04656 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP7AQ04656 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP7AQ04656 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP7AQ04656 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ATP7AQ04656 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ATP7AQ04656 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ATP7AQ04656 AC026366.1-201ENST00000488803 879 ntBASIC31.91■■■□□ 2.7
ATP7AQ04656 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC31.91■■■□□ 2.7
ATP7AQ04656 AC142381.4-202ENST00000563973 229 ntBASIC31.91■■■□□ 2.7
ATP7AQ04656 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
ATP7AQ04656 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC31.91■■■□□ 2.7
ATP7AQ04656 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.91■■■□□ 2.7
ATP7AQ04656 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC31.91■■■□□ 2.7
ATP7AQ04656 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ATP7AQ04656 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ATP7AQ04656 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC31.9■■■□□ 2.7
ATP7AQ04656 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC31.9■■■□□ 2.7
ATP7AQ04656 CD44-222ENST00000526025 1052 ntTSL 2 BASIC31.9■■■□□ 2.7
ATP7AQ04656 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
ATP7AQ04656 AP006294.2-201ENST00000641667 209 ntBASIC31.9■■■□□ 2.7
ATP7AQ04656 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ATP7AQ04656 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ATP7AQ04656 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ATP7AQ04656 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ATP7AQ04656 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ATP7AQ04656 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ATP7AQ04656 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC31.9■■■□□ 2.7
ATP7AQ04656 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC31.9■■■□□ 2.7
ATP7AQ04656 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.9■■■□□ 2.7
ATP7AQ04656 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC31.9■■■□□ 2.7
ATP7AQ04656 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
ATP7AQ04656 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC31.89■■■□□ 2.7
ATP7AQ04656 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms