Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 TRM1YDR120C 1713 nt3.04□□□□□ -1.92
VPS60Q03390 ROG1YGL144C 2058 nt3.04□□□□□ -1.92
VPS60Q03390 MIG1YGL035C 1515 nt3.03□□□□□ -1.92
VPS60Q03390 YPR148CYPR148C 1308 nt3.03□□□□□ -1.92
VPS60Q03390 PCL2YDL127W 927 nt3.03□□□□□ -1.92
VPS60Q03390 YGR026WYGR026W 837 nt3.03□□□□□ -1.92
VPS60Q03390 IRC18YJL037W 675 nt3.03□□□□□ -1.92
VPS60Q03390 PCD1YLR151C 1023 nt3.03□□□□□ -1.92
VPS60Q03390 RRG9YNL213C 645 nt3.03□□□□□ -1.92
VPS60Q03390 YBR053CYBR053C 1077 nt3.03□□□□□ -1.92
VPS60Q03390 ATG29YPL166W 642 nt3.03□□□□□ -1.92
VPS60Q03390 YPR203WYPR203W 309 nt3.03□□□□□ -1.92
VPS60Q03390 AXL1YPR122W 3627 nt3.02□□□□□ -1.93
VPS60Q03390 RIF1YBR275C 5751 nt3.02□□□□□ -1.93
VPS60Q03390 NFT1YKR103W 3657 nt3.02□□□□□ -1.93
VPS60Q03390 YPL109CYPL109C 1974 nt3.02□□□□□ -1.93
VPS60Q03390 ADH4YGL256W 1149 nt3.02□□□□□ -1.93
VPS60Q03390 YGR017WYGR017W 894 nt3.02□□□□□ -1.93
VPS60Q03390 NIT3YLR351C 876 nt3.02□□□□□ -1.93
VPS60Q03390 ERG2YMR202W 669 nt3.02□□□□□ -1.93
VPS60Q03390 ESC1YMR219W 4977 nt3.02□□□□□ -1.93
VPS60Q03390 ACA1YER045C 1470 nt3.02□□□□□ -1.93
VPS60Q03390 CHS3YBR023C 3498 nt3.02□□□□□ -1.93
VPS60Q03390 STP1YDR463W 1560 nt3.01□□□□□ -1.93
VPS60Q03390 MSB2YGR014W 3921 nt3.01□□□□□ -1.93
VPS60Q03390 AEP3YPL005W 1821 nt3.01□□□□□ -1.93
VPS60Q03390 YLR001CYLR001C 2589 nt3.01□□□□□ -1.93
VPS60Q03390 PDS1YDR113C 1122 nt3.01□□□□□ -1.93
VPS60Q03390 YDR290WYDR290W 330 nt3.01□□□□□ -1.93
VPS60Q03390 FRQ1YDR373W 573 nt3.01□□□□□ -1.93
VPS60Q03390 MST27YGL051W 705 nt3.01□□□□□ -1.93
VPS60Q03390 MRPL6YHR147C 645 nt3.01□□□□□ -1.93
VPS60Q03390 COQ9YLR201C 783 nt3.01□□□□□ -1.93
VPS60Q03390 YLR363W-AYLR363W-A 258 nt3.01□□□□□ -1.93
VPS60Q03390 SEC59YMR013C 1560 nt3□□□□□ -1.93
VPS60Q03390 RTT10YPL183C 3042 nt3□□□□□ -1.93
VPS60Q03390 YCR015CYCR015C 954 nt3□□□□□ -1.93
VPS60Q03390 BSC2YDR275W 708 nt3□□□□□ -1.93
VPS60Q03390 RMT2YDR465C 1239 nt3□□□□□ -1.93
VPS60Q03390 SUP56tL(CAA)A 82 nt3□□□□□ -1.93
VPS60Q03390 SUP53tL(CAA)C 82 nt3□□□□□ -1.93
VPS60Q03390 DDI2YFL061W 678 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)DtL(CAA)D 82 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)G1tL(CAA)G1 82 nt3□□□□□ -1.93
VPS60Q03390 SUP54tL(CAA)G2 82 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)G3tL(CAA)G3 82 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)KtL(CAA)K 82 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)LtL(CAA)L 82 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)MtL(CAA)M 82 nt3□□□□□ -1.93
VPS60Q03390 tL(CAA)NtL(CAA)N 82 nt3□□□□□ -1.93
VPS60Q03390 YIP5YGL161C 933 nt3□□□□□ -1.93
VPS60Q03390 POP6YGR030C 477 nt3□□□□□ -1.93
VPS60Q03390 RPL24BYGR148C 468 nt3□□□□□ -1.93
VPS60Q03390 CFD1YIL003W 882 nt3□□□□□ -1.93
VPS60Q03390 GCD14YJL125C 1152 nt3□□□□□ -1.93
VPS60Q03390 YJR111CYJR111C 852 nt3□□□□□ -1.93
VPS60Q03390 DID4YKL002W 699 nt3□□□□□ -1.93
VPS60Q03390 SPO20YMR017W 1194 nt3□□□□□ -1.93
VPS60Q03390 YOR082CYOR082C 342 nt3□□□□□ -1.93
VPS60Q03390 TDA1YMR291W 1761 nt3□□□□□ -1.93
VPS60Q03390 STE23YLR389C 3084 nt2.99□□□□□ -1.93
VPS60Q03390 KEL2YGR238C 2649 nt2.99□□□□□ -1.93
VPS60Q03390 DUF1YOL087C 3351 nt2.99□□□□□ -1.93
VPS60Q03390 YDL026WYDL026W 312 nt2.99□□□□□ -1.93
VPS60Q03390 PPH3YDR075W 927 nt2.99□□□□□ -1.93
VPS60Q03390 RRP8YDR083W 1179 nt2.99□□□□□ -1.93
VPS60Q03390 MRPL49YJL096W 486 nt2.99□□□□□ -1.93
VPS60Q03390 OCA2YNL056W 594 nt2.99□□□□□ -1.93
VPS60Q03390 MDJ2YNL328C 441 nt2.99□□□□□ -1.93
VPS60Q03390 YOR263CYOR263C 408 nt2.99□□□□□ -1.93
VPS60Q03390 YOR296WYOR296W 3870 nt2.99□□□□□ -1.93
VPS60Q03390 TRM12YML005W 1389 nt2.99□□□□□ -1.93
VPS60Q03390 CLN2YPL256C 1638 nt2.98□□□□□ -1.93
VPS60Q03390 CTM1YHR109W 1758 nt2.98□□□□□ -1.93
VPS60Q03390 RPS29BYDL061C 171 nt2.98□□□□□ -1.93
VPS60Q03390 VMA8YEL051W 771 nt2.98□□□□□ -1.93
VPS60Q03390 RPS23AYGR118W 438 nt2.98□□□□□ -1.93
VPS60Q03390 PFK27YOL136C 1194 nt2.98□□□□□ -1.93
VPS60Q03390 GPI2YPL076W 843 nt2.98□□□□□ -1.93
VPS60Q03390 RPS23BYPR132W 438 nt2.98□□□□□ -1.93
VPS60Q03390 GRX1YCL035C 333 nt2.98□□□□□ -1.93
VPS60Q03390 CDC55YGL190C 1581 nt2.98□□□□□ -1.93
VPS60Q03390 SIN3YOL004W 4611 nt2.98□□□□□ -1.93
VPS60Q03390 TLG1YDR468C 675 nt2.97□□□□□ -1.93
VPS60Q03390 GMH1YKR030W 822 nt2.97□□□□□ -1.93
VPS60Q03390 CAF20YOR276W 486 nt2.97□□□□□ -1.93
VPS60Q03390 MUM2YBR057C 1101 nt2.97□□□□□ -1.93
VPS60Q03390 POL3YDL102W 3294 nt2.97□□□□□ -1.93
VPS60Q03390 MDV1YJL112W 2145 nt2.96□□□□□ -1.93
VPS60Q03390 AML1YGR001C 747 nt2.96□□□□□ -1.94
VPS60Q03390 YGR107WYGR107W 450 nt2.96□□□□□ -1.94
VPS60Q03390 TFA2YKR062W 987 nt2.96□□□□□ -1.94
VPS60Q03390 TEM1YML064C 738 nt2.96□□□□□ -1.94
VPS60Q03390 YNL162W-AYNL162W-A 219 nt2.96□□□□□ -1.94
VPS60Q03390 TEX1YNL253W 1269 nt2.96□□□□□ -1.94
VPS60Q03390 RUF5-1RUF5-1 710 nt2.96□□□□□ -1.94
VPS60Q03390 RUF5-2RUF5-2 710 nt2.96□□□□□ -1.94
VPS60Q03390 YBL096CYBL096C 309 nt2.96□□□□□ -1.94
VPS60Q03390 YPR136CYPR136C 513 nt2.96□□□□□ -1.94
VPS60Q03390 YGR237CYGR237C 2358 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 91.2 ms