Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPCS3P61009 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.22■□□□□ 0.35
SPCS3P61009 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SPCS3P61009 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.22■□□□□ 0.35
SPCS3P61009 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SPCS3P61009 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.22■□□□□ 0.35
SPCS3P61009 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 AL451085.2-201ENST00000605085 799 ntBASIC17.22■□□□□ 0.35
SPCS3P61009 MIR6724-1-201ENST00000616420 92 ntBASIC17.22■□□□□ 0.35
SPCS3P61009 MIR6724-2-201ENST00000616483 92 ntBASIC17.22■□□□□ 0.35
SPCS3P61009 MIR6724-4-201ENST00000617390 92 ntBASIC17.22■□□□□ 0.35
SPCS3P61009 MIR6724-3-201ENST00000622482 92 ntBASIC17.22■□□□□ 0.35
SPCS3P61009 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SPCS3P61009 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.22■□□□□ 0.35
SPCS3P61009 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPCS3P61009 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.22■□□□□ 0.35
SPCS3P61009 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SPCS3P61009 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS3P61009 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SPCS3P61009 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS3P61009 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.21■□□□□ 0.35
SPCS3P61009 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SPCS3P61009 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS3P61009 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS3P61009 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS3P61009 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPCS3P61009 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SPCS3P61009 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SPCS3P61009 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SPCS3P61009 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SPCS3P61009 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SPCS3P61009 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.2■□□□□ 0.34
SPCS3P61009 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SPCS3P61009 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SPCS3P61009 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SPCS3P61009 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SPCS3P61009 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SPCS3P61009 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.2■□□□□ 0.34
SPCS3P61009 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SPCS3P61009 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPCS3P61009 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.19■□□□□ 0.34
SPCS3P61009 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SPCS3P61009 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 pRNA.6-201ENST00000610482 90 ntBASIC17.19■□□□□ 0.34
SPCS3P61009 pRNA.5-201ENST00000612139 90 ntBASIC17.19■□□□□ 0.34
SPCS3P61009 pRNA.11-201ENST00000618423 90 ntBASIC17.19■□□□□ 0.34
SPCS3P61009 pRNA.13-201ENST00000619112 90 ntBASIC17.19■□□□□ 0.34
SPCS3P61009 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.19■□□□□ 0.34
SPCS3P61009 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SPCS3P61009 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPCS3P61009 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.18■□□□□ 0.34
SPCS3P61009 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.18■□□□□ 0.34
SPCS3P61009 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 AC087239.1-201ENST00000622671 572 ntBASIC17.18■□□□□ 0.34
SPCS3P61009 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPCS3P61009 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.18■□□□□ 0.34
SPCS3P61009 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.18■□□□□ 0.34
SPCS3P61009 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
SPCS3P61009 AC026471.6-201ENST00000622954 1905 ntBASIC17.17■□□□□ 0.34
SPCS3P61009 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.17■□□□□ 0.34
SPCS3P61009 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
SPCS3P61009 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms