Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SEC61BP60468 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC11.43□□□□□ -0.58
SEC61BP60468 POU5F1P4-201ENST00000413175 1085 ntBASIC11.43□□□□□ -0.58
SEC61BP60468 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC11.43□□□□□ -0.58
SEC61BP60468 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 TERF1P5-201ENST00000477545 1207 ntBASIC11.43□□□□□ -0.58
SEC61BP60468 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SEC61BP60468 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 SLC7A5P2-201ENST00000553010 536 ntBASIC11.43□□□□□ -0.58
SEC61BP60468 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC11.43□□□□□ -0.58
SEC61BP60468 MIR4758-201ENST00000577688 71 ntBASIC11.43□□□□□ -0.58
SEC61BP60468 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
SEC61BP60468 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SEC61BP60468 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SEC61BP60468 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SEC61BP60468 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 DUSP8P5-201ENST00000422884 1815 ntBASIC11.42□□□□□ -0.58
SEC61BP60468 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SEC61BP60468 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SEC61BP60468 ABHD17AP1-201ENST00000358206 933 ntBASIC11.42□□□□□ -0.58
SEC61BP60468 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.42□□□□□ -0.58
SEC61BP60468 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC11.42□□□□□ -0.58
SEC61BP60468 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC11.42□□□□□ -0.58
SEC61BP60468 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SEC61BP60468 FAM201B-201ENST00000458407 597 ntBASIC11.42□□□□□ -0.58
SEC61BP60468 KRT18P6-201ENST00000555540 1265 ntBASIC11.42□□□□□ -0.58
SEC61BP60468 EEF1DP3-203ENST00000566025 782 ntBASIC11.42□□□□□ -0.58
SEC61BP60468 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC11.42□□□□□ -0.58
SEC61BP60468 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
SEC61BP60468 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SEC61BP60468 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 AP006587.3-201ENST00000525742 1516 ntBASIC11.41□□□□□ -0.58
SEC61BP60468 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.41□□□□□ -0.58
SEC61BP60468 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 AC073210.2-201ENST00000430369 194 ntBASIC11.41□□□□□ -0.58
SEC61BP60468 AC069152.1-201ENST00000438030 544 ntBASIC11.41□□□□□ -0.58
SEC61BP60468 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.41□□□□□ -0.58
SEC61BP60468 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC11.41□□□□□ -0.58
SEC61BP60468 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 AL050303.2-201ENST00000619798 666 ntBASIC11.41□□□□□ -0.58
SEC61BP60468 OR10C1-204ENST00000622521 1039 ntBASIC11.41□□□□□ -0.58
SEC61BP60468 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC11.41□□□□□ -0.58
SEC61BP60468 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SEC61BP60468 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC11.41□□□□□ -0.58
SEC61BP60468 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SEC61BP60468 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SEC61BP60468 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SEC61BP60468 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC11.4□□□□□ -0.58
SEC61BP60468 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms