Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR2JP52435 AL034346.1-201ENST00000568244 1277 ntBASIC20.32■□□□□ 0.84
POLR2JP52435 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
POLR2JP52435 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
POLR2JP52435 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
POLR2JP52435 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
POLR2JP52435 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR2JP52435 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 LINC01521-201ENST00000504184 1943 ntBASIC20.31■□□□□ 0.84
POLR2JP52435 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
POLR2JP52435 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
POLR2JP52435 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR2JP52435 MIR3621-201ENST00000580529 85 ntBASIC20.31■□□□□ 0.84
POLR2JP52435 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR2JP52435 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 AC092171.4-201ENST00000609130 632 ntBASIC20.31■□□□□ 0.84
POLR2JP52435 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.31■□□□□ 0.84
POLR2JP52435 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR2JP52435 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR2JP52435 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR2JP52435 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR2JP52435 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.3■□□□□ 0.84
POLR2JP52435 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
POLR2JP52435 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
POLR2JP52435 SRD5A1P1-201ENST00000442297 786 ntBASIC20.3■□□□□ 0.84
POLR2JP52435 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.3■□□□□ 0.84
POLR2JP52435 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
POLR2JP52435 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR2JP52435 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR2JP52435 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
POLR2JP52435 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.29■□□□□ 0.84
POLR2JP52435 AC003102.1-202ENST00000563394 1796 ntBASIC20.29■□□□□ 0.84
POLR2JP52435 AL049796.1-201ENST00000565336 1766 ntBASIC20.29■□□□□ 0.84
POLR2JP52435 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR2JP52435 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR2JP52435 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
POLR2JP52435 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR2JP52435 AP004607.7-201ENST00000527152 1677 ntBASIC20.29■□□□□ 0.84
POLR2JP52435 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
POLR2JP52435 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
POLR2JP52435 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2JP52435 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
POLR2JP52435 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2JP52435 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.28■□□□□ 0.84
POLR2JP52435 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2JP52435 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
POLR2JP52435 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.28■□□□□ 0.84
POLR2JP52435 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR2JP52435 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR2JP52435 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR2JP52435 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
POLR2JP52435 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
POLR2JP52435 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR2JP52435 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
POLR2JP52435 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.27■□□□□ 0.84
POLR2JP52435 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
POLR2JP52435 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.27■□□□□ 0.84
POLR2JP52435 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.27■□□□□ 0.84
POLR2JP52435 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR2JP52435 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
POLR2JP52435 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
POLR2JP52435 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
POLR2JP52435 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR2JP52435 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR2JP52435 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR2JP52435 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR2JP52435 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
POLR2JP52435 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms