Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC244015.2-201ENST00000616358 1861 ntBASIC17.53■□□□□ 0.4
THBS3P49746 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 EDA-201ENST00000338901 1233 ntBASIC17.53■□□□□ 0.4
THBS3P49746 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
THBS3P49746 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
THBS3P49746 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
THBS3P49746 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.53■□□□□ 0.4
THBS3P49746 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
THBS3P49746 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THBS3P49746 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THBS3P49746 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS3P49746 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.52■□□□□ 0.4
THBS3P49746 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS3P49746 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.52■□□□□ 0.4
THBS3P49746 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
THBS3P49746 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.52■□□□□ 0.4
THBS3P49746 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THBS3P49746 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS3P49746 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
THBS3P49746 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
THBS3P49746 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
THBS3P49746 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.52■□□□□ 0.39
THBS3P49746 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
THBS3P49746 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
THBS3P49746 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 SERBP1P1-201ENST00000396021 1160 ntBASIC17.51■□□□□ 0.39
THBS3P49746 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
THBS3P49746 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 AL031432.3-201ENST00000607698 485 ntBASIC17.51■□□□□ 0.39
THBS3P49746 AL355001.2-201ENST00000620617 1191 ntBASIC17.51■□□□□ 0.39
THBS3P49746 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
THBS3P49746 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
THBS3P49746 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.51■□□□□ 0.39
THBS3P49746 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS3P49746 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 SUDS3P1-201ENST00000505831 966 ntBASIC17.5■□□□□ 0.39
THBS3P49746 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.5■□□□□ 0.39
THBS3P49746 AC011298.3-201ENST00000615796 283 ntBASIC17.5■□□□□ 0.39
THBS3P49746 AC136469.2-201ENST00000623944 1028 ntBASIC17.5■□□□□ 0.39
THBS3P49746 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
THBS3P49746 OXCT2P1-201ENST00000447263 1535 ntBASIC17.5■□□□□ 0.39
THBS3P49746 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.5■□□□□ 0.39
THBS3P49746 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
THBS3P49746 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
THBS3P49746 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.5■□□□□ 0.39
THBS3P49746 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS3P49746 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.49■□□□□ 0.39
THBS3P49746 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
THBS3P49746 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 SLC25A24-204ENST00000569674 2357 ntBASIC17.49■□□□□ 0.39
THBS3P49746 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
THBS3P49746 AC010525.1-201ENST00000585559 441 ntBASIC17.49■□□□□ 0.39
THBS3P49746 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.49■□□□□ 0.39
THBS3P49746 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
THBS3P49746 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
THBS3P49746 AC138932.1-201ENST00000534164 6830 ntBASIC17.48■□□□□ 0.39
THBS3P49746 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.48■□□□□ 0.39
THBS3P49746 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
THBS3P49746 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.48■□□□□ 0.39
THBS3P49746 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.48■□□□□ 0.39
THBS3P49746 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.48■□□□□ 0.39
THBS3P49746 AL034346.1-201ENST00000568244 1277 ntBASIC17.48■□□□□ 0.39
THBS3P49746 AC104564.3-201ENST00000582367 638 ntBASIC17.48■□□□□ 0.39
THBS3P49746 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.48■□□□□ 0.39
THBS3P49746 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.48■□□□□ 0.39
THBS3P49746 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
THBS3P49746 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
THBS3P49746 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
THBS3P49746 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms