Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4P48539 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCP4P48539 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PCP4P48539 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
PCP4P48539 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCP4P48539 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.83□□□□□ -0.04
PCP4P48539 AC242852.2-201ENST00000615738 1807 ntBASIC14.83□□□□□ -0.04
PCP4P48539 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.83□□□□□ -0.04
PCP4P48539 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.83□□□□□ -0.04
PCP4P48539 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCP4P48539 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4P48539 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCP4P48539 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCP4P48539 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.82□□□□□ -0.04
PCP4P48539 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCP4P48539 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.82□□□□□ -0.04
PCP4P48539 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCP4P48539 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PCP4P48539 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4P48539 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PCP4P48539 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
PCP4P48539 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PCP4P48539 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.81□□□□□ -0.04
PCP4P48539 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PCP4P48539 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.81□□□□□ -0.04
PCP4P48539 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.81□□□□□ -0.04
PCP4P48539 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCP4P48539 AP000974.1-201ENST00000623909 2387 ntBASIC14.81□□□□□ -0.04
PCP4P48539 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCP4P48539 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.8□□□□□ -0.04
PCP4P48539 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
PCP4P48539 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCP4P48539 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
PCP4P48539 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCP4P48539 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.8□□□□□ -0.04
PCP4P48539 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCP4P48539 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
PCP4P48539 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCP4P48539 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCP4P48539 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCP4P48539 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCP4P48539 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.79□□□□□ -0.04
PCP4P48539 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCP4P48539 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms