Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 DPH1YIL103W 1278 nt2.9□□□□□ -1.95
CDC40P40968 RPS21BYJL136C 264 nt2.9□□□□□ -1.95
CDC40P40968 HOT13YKL084W 351 nt2.9□□□□□ -1.95
CDC40P40968 ENV10YLR065C 546 nt2.9□□□□□ -1.95
CDC40P40968 YML116W-AYML116W-A 303 nt2.9□□□□□ -1.95
CDC40P40968 YMR087WYMR087W 855 nt2.9□□□□□ -1.95
CDC40P40968 YOR131CYOR131C 657 nt2.9□□□□□ -1.95
CDC40P40968 SLX1YBR228W 915 nt2.9□□□□□ -1.95
CDC40P40968 NET1YJL076W 3570 nt2.9□□□□□ -1.95
CDC40P40968 GLC3YEL011W 2115 nt2.9□□□□□ -1.95
CDC40P40968 SEC2YNL272C 2280 nt2.9□□□□□ -1.95
CDC40P40968 EXO84YBR102C 2262 nt2.9□□□□□ -1.95
CDC40P40968 TCP1YDR212W 1680 nt2.89□□□□□ -1.95
CDC40P40968 AI2Q0055 2565 nt2.89□□□□□ -1.95
CDC40P40968 SNU23YDL098C 585 nt2.89□□□□□ -1.95
CDC40P40968 PKH1YDR490C 2301 nt2.89□□□□□ -1.95
CDC40P40968 MIT1YEL007W 2001 nt2.89□□□□□ -1.95
CDC40P40968 YER039C-AYER039C-A 219 nt2.89□□□□□ -1.95
CDC40P40968 NNT1YLR285W 786 nt2.89□□□□□ -1.95
CDC40P40968 GIS2YNL255C 462 nt2.89□□□□□ -1.95
CDC40P40968 YPR108W-AYPR108W-A 213 nt2.89□□□□□ -1.95
CDC40P40968 CTP1YBR291C 900 nt2.89□□□□□ -1.95
CDC40P40968 CDC40YDR364C 1368 nt2.88□□□□□ -1.95
CDC40P40968 VPS9YML097C 1356 nt2.88□□□□□ -1.95
CDC40P40968 MUS81YDR386W 1899 nt2.88□□□□□ -1.95
CDC40P40968 TOM70YNL121C 1854 nt2.88□□□□□ -1.95
CDC40P40968 NOP4YPL043W 2058 nt2.88□□□□□ -1.95
CDC40P40968 CIK1YMR198W 1785 nt2.88□□□□□ -1.95
CDC40P40968 YFR010W-AYFR010W-A 189 nt2.88□□□□□ -1.95
CDC40P40968 CNN1YFR046C 1086 nt2.88□□□□□ -1.95
CDC40P40968 GAB1YLR459W 1185 nt2.88□□□□□ -1.95
CDC40P40968 TEM1YML064C 738 nt2.88□□□□□ -1.95
CDC40P40968 ERG2YMR202W 669 nt2.88□□□□□ -1.95
CDC40P40968 APD1YBR151W 951 nt2.88□□□□□ -1.95
CDC40P40968 STE23YLR389C 3084 nt2.88□□□□□ -1.95
CDC40P40968 YBR225WYBR225W 2703 nt2.87□□□□□ -1.95
CDC40P40968 DIA2YOR080W 2199 nt2.87□□□□□ -1.95
CDC40P40968 RAD55YDR076W 1221 nt2.87□□□□□ -1.95
CDC40P40968 AHA1YDR214W 1053 nt2.87□□□□□ -1.95
CDC40P40968 NSA2YER126C 786 nt2.87□□□□□ -1.95
CDC40P40968 PUG1YER185W 912 nt2.87□□□□□ -1.95
CDC40P40968 PFS1YHR185C 714 nt2.87□□□□□ -1.95
CDC40P40968 RPS21AYKR057W 264 nt2.87□□□□□ -1.95
CDC40P40968 BET5YML077W 480 nt2.87□□□□□ -1.95
CDC40P40968 TRI1YMR233W 681 nt2.87□□□□□ -1.95
CDC40P40968 DSC2YOL073C 969 nt2.87□□□□□ -1.95
CDC40P40968 YOR203WYOR203W 354 nt2.87□□□□□ -1.95
CDC40P40968 PPT2YPL148C 522 nt2.87□□□□□ -1.95
CDC40P40968 PHO81YGR233C 3537 nt2.86□□□□□ -1.95
CDC40P40968 AAD3YCR107W 1092 nt2.86□□□□□ -1.95
CDC40P40968 AIM7YDR063W 450 nt2.86□□□□□ -1.95
CDC40P40968 RTT105YER104W 627 nt2.86□□□□□ -1.95
CDC40P40968 YLR412C-AYLR412C-A 207 nt2.86□□□□□ -1.95
CDC40P40968 CTL1YMR180C 963 nt2.86□□□□□ -1.95
CDC40P40968 YOL118CYOL118C 309 nt2.86□□□□□ -1.95
CDC40P40968 CHA4YLR098C 1947 nt2.85□□□□□ -1.95
CDC40P40968 YDR131CYDR131C 1671 nt2.85□□□□□ -1.95
CDC40P40968 YDR442WYDR442W 393 nt2.85□□□□□ -1.95
CDC40P40968 RPS8BYER102W 603 nt2.85□□□□□ -1.95
CDC40P40968 SPT15YER148W 723 nt2.85□□□□□ -1.95
CDC40P40968 GLG2YJL137C 1143 nt2.85□□□□□ -1.95
CDC40P40968 MET14YKL001C 609 nt2.85□□□□□ -1.95
CDC40P40968 GTT2YLL060C 702 nt2.85□□□□□ -1.95
CDC40P40968 RPS8AYBL072C 603 nt2.85□□□□□ -1.95
CDC40P40968 GCN1YGL195W 8019 nt2.85□□□□□ -1.95
CDC40P40968 YPS6YIR039C 1614 nt2.85□□□□□ -1.95
CDC40P40968 RPN1YHR027C 2982 nt2.84□□□□□ -1.95
CDC40P40968 LOS1YKL205W 3303 nt2.84□□□□□ -1.95
CDC40P40968 YDL228CYDL228C 642 nt2.84□□□□□ -1.95
CDC40P40968 AI3Q0060 1248 nt2.84□□□□□ -1.95
CDC40P40968 YDR320W-BYDR320W-B 138 nt2.84□□□□□ -1.95
CDC40P40968 YGL082WYGL082W 1146 nt2.84□□□□□ -1.95
CDC40P40968 TDA10YGR205W 873 nt2.84□□□□□ -1.95
CDC40P40968 YHR182C-AYHR182C-A 474 nt2.84□□□□□ -1.95
CDC40P40968 DLS1YJL065C 504 nt2.84□□□□□ -1.95
CDC40P40968 CDC8YJR057W 651 nt2.84□□□□□ -1.95
CDC40P40968 YLR076CYLR076C 423 nt2.84□□□□□ -1.95
CDC40P40968 YNL203CYNL203C 612 nt2.84□□□□□ -1.95
CDC40P40968 ATG34YOL083W 1239 nt2.84□□□□□ -1.95
CDC40P40968 APC5YOR249C 2058 nt2.84□□□□□ -1.95
CDC40P40968 RRP14YKL082C 1305 nt2.84□□□□□ -1.96
CDC40P40968 RSN1YMR266W 2862 nt2.84□□□□□ -1.96
CDC40P40968 ENP2YGR145W 2124 nt2.84□□□□□ -1.96
CDC40P40968 SPO71YDR104C 3738 nt2.84□□□□□ -1.96
CDC40P40968 CSR2YPR030W 3366 nt2.84□□□□□ -1.96
CDC40P40968 FAR8YMR029C 1572 nt2.83□□□□□ -1.96
CDC40P40968 FRE2YKL220C 2136 nt2.83□□□□□ -1.96
CDC40P40968 BNI4YNL233W 2679 nt2.83□□□□□ -1.96
CDC40P40968 TCA17YEL048C 459 nt2.83□□□□□ -1.96
CDC40P40968 YHR032C-AYHR032C-A 120 nt2.83□□□□□ -1.96
CDC40P40968 RSF1YMR030W 1131 nt2.83□□□□□ -1.96
CDC40P40968 ECM13YBL043W 774 nt2.83□□□□□ -1.96
CDC40P40968 SSU72YNL222W 621 nt2.83□□□□□ -1.96
CDC40P40968 GRX7YBR014C 612 nt2.83□□□□□ -1.96
CDC40P40968 MAK5YBR142W 2322 nt2.83□□□□□ -1.96
CDC40P40968 HFM1YGL251C 3564 nt2.83□□□□□ -1.96
CDC40P40968 NOG1YPL093W 1944 nt2.83□□□□□ -1.96
CDC40P40968 ROD1YOR018W 2514 nt2.83□□□□□ -1.96
CDC40P40968 YMR317WYMR317W 3423 nt2.83□□□□□ -1.96
CDC40P40968 URA2YJL130C 6645 nt2.83□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms