Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RASA4CP-201ENST00000424092 1398 ntBASIC20.14■□□□□ 0.81
KRT20P35900 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 MIR638-201ENST00000385237 100 ntBASIC20.14■□□□□ 0.81
KRT20P35900 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
KRT20P35900 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT20P35900 AC010141.3-201ENST00000456659 717 ntBASIC20.14■□□□□ 0.81
KRT20P35900 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT20P35900 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT20P35900 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT20P35900 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT20P35900 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT20P35900 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
KRT20P35900 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
KRT20P35900 MIR939-201ENST00000401314 82 ntBASIC20.13■□□□□ 0.81
KRT20P35900 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
KRT20P35900 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
KRT20P35900 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT20P35900 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT20P35900 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT20P35900 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT20P35900 AC010542.4-201ENST00000563151 1910 ntBASIC20.12■□□□□ 0.81
KRT20P35900 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT20P35900 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
KRT20P35900 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT20P35900 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT20P35900 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT20P35900 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT20P35900 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT20P35900 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT20P35900 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.11■□□□□ 0.81
KRT20P35900 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
KRT20P35900 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KRT20P35900 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT20P35900 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT20P35900 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KRT20P35900 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.11■□□□□ 0.81
KRT20P35900 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.11■□□□□ 0.81
KRT20P35900 CA15P2-201ENST00000611168 834 ntBASIC20.11■□□□□ 0.81
KRT20P35900 AL136967.2-201ENST00000623968 743 ntBASIC20.11■□□□□ 0.81
KRT20P35900 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT20P35900 AC073130.3-201ENST00000624389 2278 ntBASIC20.1■□□□□ 0.81
KRT20P35900 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT20P35900 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT20P35900 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.1■□□□□ 0.81
KRT20P35900 SUDS3P1-201ENST00000505831 966 ntBASIC20.1■□□□□ 0.81
KRT20P35900 IGHV3-19-201ENST00000521488 291 ntBASIC20.1■□□□□ 0.81
KRT20P35900 AL031432.3-201ENST00000607698 485 ntBASIC20.1■□□□□ 0.81
KRT20P35900 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
KRT20P35900 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT20P35900 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
KRT20P35900 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT20P35900 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT20P35900 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT20P35900 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
KRT20P35900 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT20P35900 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT20P35900 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
KRT20P35900 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT20P35900 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
KRT20P35900 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT20P35900 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KRT20P35900 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT20P35900 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
KRT20P35900 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT20P35900 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT20P35900 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT20P35900 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT20P35900 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
KRT20P35900 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
KRT20P35900 AC005229.4-201ENST00000610085 2198 ntBASIC20.08■□□□□ 0.81
KRT20P35900 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT20P35900 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT20P35900 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT20P35900 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT20P35900 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
KRT20P35900 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT20P35900 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT20P35900 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT20P35900 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRT20P35900 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 TSPY26P-201ENST00000476365 1326 ntBASIC20.07■□□□□ 0.8
KRT20P35900 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
KRT20P35900 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT20P35900 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms