Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.98■□□□□ 0.47
COL8A2P25067 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.98■□□□□ 0.47
COL8A2P25067 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.98■□□□□ 0.47
COL8A2P25067 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.98■□□□□ 0.47
COL8A2P25067 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.98■□□□□ 0.47
COL8A2P25067 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.98■□□□□ 0.47
COL8A2P25067 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.98■□□□□ 0.47
COL8A2P25067 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.98■□□□□ 0.47
COL8A2P25067 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.98■□□□□ 0.47
COL8A2P25067 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL8A2P25067 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
COL8A2P25067 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.98■□□□□ 0.47
COL8A2P25067 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.97■□□□□ 0.47
COL8A2P25067 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
COL8A2P25067 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.97■□□□□ 0.47
COL8A2P25067 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.97■□□□□ 0.47
COL8A2P25067 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
COL8A2P25067 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL8A2P25067 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL8A2P25067 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL8A2P25067 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.96■□□□□ 0.47
COL8A2P25067 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.96■□□□□ 0.47
COL8A2P25067 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.96■□□□□ 0.47
COL8A2P25067 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 AC080038.3-201ENST00000623346 1952 ntBASIC17.96■□□□□ 0.47
COL8A2P25067 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL8A2P25067 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL8A2P25067 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.96■□□□□ 0.47
COL8A2P25067 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.96■□□□□ 0.47
COL8A2P25067 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL8A2P25067 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.95■□□□□ 0.46
COL8A2P25067 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.95■□□□□ 0.46
COL8A2P25067 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.95■□□□□ 0.46
COL8A2P25067 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.95■□□□□ 0.46
COL8A2P25067 RAP2CP1-201ENST00000605103 478 ntBASIC17.95■□□□□ 0.46
COL8A2P25067 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL8A2P25067 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL8A2P25067 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL8A2P25067 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.94■□□□□ 0.46
COL8A2P25067 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL8A2P25067 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL8A2P25067 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL8A2P25067 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL8A2P25067 AC026185.1-201ENST00000445748 174 ntBASIC17.94■□□□□ 0.46
COL8A2P25067 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.94■□□□□ 0.46
COL8A2P25067 UBE2DNL-204ENST00000602536 740 ntBASIC17.94■□□□□ 0.46
COL8A2P25067 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
COL8A2P25067 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL8A2P25067 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL8A2P25067 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.93■□□□□ 0.46
COL8A2P25067 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.93■□□□□ 0.46
COL8A2P25067 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.93■□□□□ 0.46
COL8A2P25067 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
COL8A2P25067 AC138907.5-202ENST00000569484 235 ntBASIC17.93■□□□□ 0.46
COL8A2P25067 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL8A2P25067 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.93■□□□□ 0.46
COL8A2P25067 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms