Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC097658.1-201ENST00000475555 843 ntBASIC26.42■■□□□ 1.82
COL11A2P13942 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.42■■□□□ 1.82
COL11A2P13942 AL162412.1-201ENST00000567129 965 ntBASIC26.42■■□□□ 1.82
COL11A2P13942 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.42■■□□□ 1.82
COL11A2P13942 AC008694.1-202ENST00000636953 945 ntBASIC26.42■■□□□ 1.82
COL11A2P13942 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL11A2P13942 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.41■■□□□ 1.82
COL11A2P13942 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.41■■□□□ 1.82
COL11A2P13942 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL11A2P13942 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.41■■□□□ 1.82
COL11A2P13942 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL11A2P13942 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL11A2P13942 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.4■■□□□ 1.82
COL11A2P13942 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A2P13942 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.4■■□□□ 1.82
COL11A2P13942 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.4■■□□□ 1.82
COL11A2P13942 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A2P13942 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.4■■□□□ 1.82
COL11A2P13942 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.4■■□□□ 1.82
COL11A2P13942 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A2P13942 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A2P13942 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.4■■□□□ 1.82
COL11A2P13942 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
COL11A2P13942 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A2P13942 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
COL11A2P13942 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A2P13942 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A2P13942 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.39■■□□□ 1.82
COL11A2P13942 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A2P13942 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A2P13942 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
COL11A2P13942 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL11A2P13942 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL11A2P13942 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL11A2P13942 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.39■■□□□ 1.81
COL11A2P13942 KRT16P2-201ENST00000414673 1423 ntBASIC26.39■■□□□ 1.81
COL11A2P13942 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.39■■□□□ 1.81
COL11A2P13942 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.38■■□□□ 1.81
COL11A2P13942 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
COL11A2P13942 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL11A2P13942 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL11A2P13942 AC026366.1-201ENST00000488803 879 ntBASIC26.38■■□□□ 1.81
COL11A2P13942 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
COL11A2P13942 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.38■■□□□ 1.81
COL11A2P13942 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.38■■□□□ 1.81
COL11A2P13942 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A2P13942 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A2P13942 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A2P13942 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A2P13942 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A2P13942 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.37■■□□□ 1.81
COL11A2P13942 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A2P13942 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.37■■□□□ 1.81
COL11A2P13942 AC008403.3-201ENST00000598924 454 ntBASIC26.37■■□□□ 1.81
COL11A2P13942 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.37■■□□□ 1.81
COL11A2P13942 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A2P13942 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
COL11A2P13942 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.36■■□□□ 1.81
COL11A2P13942 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
COL11A2P13942 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.36■■□□□ 1.81
COL11A2P13942 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
COL11A2P13942 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.36■■□□□ 1.81
COL11A2P13942 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL11A2P13942 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.36■■□□□ 1.81
COL11A2P13942 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL11A2P13942 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL11A2P13942 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.35■■□□□ 1.81
COL11A2P13942 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.35■■□□□ 1.81
COL11A2P13942 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.35■■□□□ 1.81
COL11A2P13942 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.35■■□□□ 1.81
COL11A2P13942 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.35■■□□□ 1.81
COL11A2P13942 AC073648.6-201ENST00000641589 218 ntBASIC26.35■■□□□ 1.81
COL11A2P13942 AP006294.2-201ENST00000641667 209 ntBASIC26.35■■□□□ 1.81
COL11A2P13942 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.35■■□□□ 1.81
COL11A2P13942 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.35■■□□□ 1.81
COL11A2P13942 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
COL11A2P13942 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A2P13942 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL11A2P13942 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.34■■□□□ 1.81
COL11A2P13942 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.34■■□□□ 1.81
COL11A2P13942 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
COL11A2P13942 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.34■■□□□ 1.81
COL11A2P13942 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
COL11A2P13942 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
COL11A2P13942 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms