Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 HOM2YDR158W 1098 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 YDR415CYDR415C 1125 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 RPB9YGL070C 369 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 FEX1YOR390W 1128 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 MTL1YGR023W 1656 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 NDD1YOR372C 1665 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 MAL33YBR297W 1407 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 NUG1YER006W 1563 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 SEC59YMR013C 1560 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 MTC5YDR128W 3447 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 PAT1YCR077C 2391 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 TPO5YKL174C 1857 nt5.71□□□□□ -1.5
TY1A-PR2P0CX60 SPC97YHR172W 2472 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 LAP3YNL239W 1365 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 YDR183C-AYDR183C-A 258 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 COX4YGL187C 468 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 HYR1YIR037W 492 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 RMP1YLR145W 606 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 YOL114CYOL114C 609 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 RCR1YBR005W 642 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 FSH3YOR280C 801 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 snR48snR48 113 nt5.7□□□□□ -1.5
TY1A-PR2P0CX60 RRN11YML043C 1524 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 COX9YDL067C 180 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 PET117YER058W 324 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 YPT1YFL038C 621 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 IDP2YLR174W 1239 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 FPK1YNR047W 2682 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 QDR1YIL120W 1692 nt5.69□□□□□ -1.5
TY1A-PR2P0CX60 ULA1YPL003W 1389 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 IMD2YHR216W 1572 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 LST4YKL176C 2487 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 MSS4YDR208W 2340 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 MRC1YCL061C 3291 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 YDR274CYDR274C 372 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 SNZ3YFL059W 897 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 YFL042CYFL042C 2025 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 PPQ1YPL179W 1650 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 CDC6YJL194W 1542 nt5.68□□□□□ -1.5
TY1A-PR2P0CX60 MET7YOR241W 1647 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 TEA1YOR337W 2280 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 RPS14AYCR031C 414 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 RRP45YDR280W 918 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 RPA34YJL148W 702 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 FBA1YKL060C 1080 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 PKR1YMR123W 369 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 MRPS5YBR251W 924 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 IRC10YOL015W 1761 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 YVC1YOR087W 2028 nt5.67□□□□□ -1.5
TY1A-PR2P0CX60 SPE1YKL184W 1401 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 SSA2YLL024C 1920 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 ATG4YNL223W 1485 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 YLR152CYLR152C 1731 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 SFB3YHR098C 2790 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 YCR097W-AYCR097W-A 267 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 YDR133CYDR133C 336 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 DFM1YDR411C 1026 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 GOS1YHL031C 672 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 YIL171WYIL171W 330 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 MRPS12YNR036C 462 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 DCS2YOR173W 1062 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 SGF29YCL010C 780 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 snR51snR51 107 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 SOG2YOR353C 2376 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 LSG1YGL099W 1923 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 RRI2YOL117W 1938 nt5.66□□□□□ -1.5
TY1A-PR2P0CX60 DIT2YDR402C 1470 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 PAC1YOR269W 1485 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 DHR2YKL078W 2208 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 YDR154CYDR154C 351 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)BtG(GCC)B 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 SUF16tG(GCC)C 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)D1tG(GCC)D1 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)D2tG(GCC)D2 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)EtG(GCC)E 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 SUF20tG(GCC)F1 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 YDR537CYDR537C 606 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)F2tG(GCC)F2 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)G1tG(GCC)G1 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)G2tG(GCC)G2 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)J1tG(GCC)J1 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 SUF23tG(GCC)J2 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)MtG(GCC)M 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)O1tG(GCC)O1 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 SUF17tG(GCC)O2 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)P1tG(GCC)P1 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 tG(GCC)P2tG(GCC)P2 71 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 SMX2YFL017W-A 234 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 APQ12YIL040W 417 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 RPS3YNL178W 723 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 ZEO1YOL109W 342 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 YBR113WYBR113W 483 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 SHG1YBR258C 429 nt5.65□□□□□ -1.5
TY1A-PR2P0CX60 STP2YHR006W 1626 nt5.65□□□□□ -1.51
TY1A-PR2P0CX60 ARG4YHR018C 1392 nt5.65□□□□□ -1.51
TY1A-PR2P0CX60 THI2YBR240C 1353 nt5.65□□□□□ -1.51
TY1A-PR2P0CX60 LAT1YNL071W 1449 nt5.65□□□□□ -1.51
TY1A-PR2P0CX60 STT3YGL022W 2157 nt5.65□□□□□ -1.51
TY1A-PR2P0CX60 AEP3YPL005W 1821 nt5.64□□□□□ -1.51
TY1A-PR2P0CX60 YOL036WYOL036W 2286 nt5.64□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 26.1 ms