Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 POU5F1P4-201ENST00000413175 1085 ntBASIC27.28■■□□□ 1.96
SNRPA1P09661 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
SNRPA1P09661 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.28■■□□□ 1.96
SNRPA1P09661 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.28■■□□□ 1.96
SNRPA1P09661 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNRPA1P09661 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNRPA1P09661 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.28■■□□□ 1.96
SNRPA1P09661 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
SNRPA1P09661 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNRPA1P09661 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SNRPA1P09661 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SNRPA1P09661 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNRPA1P09661 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.27■■□□□ 1.96
SNRPA1P09661 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNRPA1P09661 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.27■■□□□ 1.96
SNRPA1P09661 AC120498.10-201ENST00000621827 505 ntBASIC27.27■■□□□ 1.96
SNRPA1P09661 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNRPA1P09661 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SNRPA1P09661 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNRPA1P09661 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
SNRPA1P09661 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
SNRPA1P09661 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SNRPA1P09661 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
SNRPA1P09661 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.26■■□□□ 1.95
SNRPA1P09661 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.26■■□□□ 1.95
SNRPA1P09661 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNRPA1P09661 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.26■■□□□ 1.95
SNRPA1P09661 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.26■■□□□ 1.95
SNRPA1P09661 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.26■■□□□ 1.95
SNRPA1P09661 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
SNRPA1P09661 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNRPA1P09661 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNRPA1P09661 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.25■■□□□ 1.95
SNRPA1P09661 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SNRPA1P09661 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SNRPA1P09661 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.25■■□□□ 1.95
SNRPA1P09661 ABHD17AP1-201ENST00000358206 933 ntBASIC27.25■■□□□ 1.95
SNRPA1P09661 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.25■■□□□ 1.95
SNRPA1P09661 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SNRPA1P09661 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.25■■□□□ 1.95
SNRPA1P09661 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SNRPA1P09661 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.25■■□□□ 1.95
SNRPA1P09661 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNRPA1P09661 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNRPA1P09661 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.25■■□□□ 1.95
SNRPA1P09661 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.24■■□□□ 1.95
SNRPA1P09661 CYP2T1P-201ENST00000432607 1285 ntBASIC27.24■■□□□ 1.95
SNRPA1P09661 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.24■■□□□ 1.95
SNRPA1P09661 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.24■■□□□ 1.95
SNRPA1P09661 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
SNRPA1P09661 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.24■■□□□ 1.95
SNRPA1P09661 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.24■■□□□ 1.95
SNRPA1P09661 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 AC092053.2-201ENST00000640557 1818 ntBASIC27.23■■□□□ 1.95
SNRPA1P09661 RARG-204ENST00000543726 1779 ntTSL 2 BASIC27.23■■□□□ 1.95
SNRPA1P09661 AC003102.1-202ENST00000563394 1796 ntBASIC27.23■■□□□ 1.95
SNRPA1P09661 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.23■■□□□ 1.95
SNRPA1P09661 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.23■■□□□ 1.95
SNRPA1P09661 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.23■■□□□ 1.95
SNRPA1P09661 CD99P1-205ENST00000527459 561 ntBASIC27.23■■□□□ 1.95
SNRPA1P09661 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.23■■□□□ 1.95
SNRPA1P09661 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.23■■□□□ 1.95
SNRPA1P09661 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.23■■□□□ 1.95
SNRPA1P09661 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.23■■□□□ 1.95
SNRPA1P09661 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNRPA1P09661 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SNRPA1P09661 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.22■■□□□ 1.95
SNRPA1P09661 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNRPA1P09661 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
SNRPA1P09661 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SNRPA1P09661 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.22■■□□□ 1.95
SNRPA1P09661 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.22■■□□□ 1.95
SNRPA1P09661 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.22■■□□□ 1.95
SNRPA1P09661 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.22■■□□□ 1.95
SNRPA1P09661 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.22■■□□□ 1.95
SNRPA1P09661 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNRPA1P09661 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNRPA1P09661 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNRPA1P09661 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNRPA1P09661 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNRPA1P09661 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.21■■□□□ 1.95
SNRPA1P09661 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC27.21■■□□□ 1.95
SNRPA1P09661 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNRPA1P09661 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNRPA1P09661 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNRPA1P09661 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.21■■□□□ 1.95
SNRPA1P09661 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNRPA1P09661 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.21■■□□□ 1.95
SNRPA1P09661 AC073210.2-201ENST00000430369 194 ntBASIC27.21■■□□□ 1.95
SNRPA1P09661 AC069152.1-201ENST00000438030 544 ntBASIC27.21■■□□□ 1.95
SNRPA1P09661 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.21■■□□□ 1.95
SNRPA1P09661 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNRPA1P09661 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.21■■□□□ 1.95
SNRPA1P09661 KRT16P2-201ENST00000414673 1423 ntBASIC27.21■■□□□ 1.95
SNRPA1P09661 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms