Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.09■■□□□ 1.61
COL2A1P02458 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.09■■□□□ 1.61
COL2A1P02458 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
COL2A1P02458 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.09■■□□□ 1.61
COL2A1P02458 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL2A1P02458 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL2A1P02458 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL2A1P02458 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.09■■□□□ 1.61
COL2A1P02458 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.09■■□□□ 1.61
COL2A1P02458 AC133041.1-202ENST00000642053 222 ntBASIC25.09■■□□□ 1.61
COL2A1P02458 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL2A1P02458 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.08■■□□□ 1.61
COL2A1P02458 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL2A1P02458 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL2A1P02458 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL2A1P02458 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL2A1P02458 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL2A1P02458 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.08■■□□□ 1.61
COL2A1P02458 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL2A1P02458 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
COL2A1P02458 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.08■■□□□ 1.6
COL2A1P02458 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.08■■□□□ 1.6
COL2A1P02458 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
COL2A1P02458 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL2A1P02458 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
COL2A1P02458 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.07■■□□□ 1.6
COL2A1P02458 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
COL2A1P02458 AL512625.2-201ENST00000417533 625 ntBASIC25.07■■□□□ 1.6
COL2A1P02458 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL2A1P02458 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.07■■□□□ 1.6
COL2A1P02458 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL2A1P02458 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.07■■□□□ 1.6
COL2A1P02458 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
COL2A1P02458 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL2A1P02458 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL2A1P02458 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.07■■□□□ 1.6
COL2A1P02458 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL2A1P02458 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
COL2A1P02458 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL2A1P02458 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
COL2A1P02458 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.06■■□□□ 1.6
COL2A1P02458 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.06■■□□□ 1.6
COL2A1P02458 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.06■■□□□ 1.6
COL2A1P02458 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.06■■□□□ 1.6
COL2A1P02458 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.06■■□□□ 1.6
COL2A1P02458 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL2A1P02458 AC003102.1-202ENST00000563394 1796 ntBASIC25.05■■□□□ 1.6
COL2A1P02458 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.05■■□□□ 1.6
COL2A1P02458 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
COL2A1P02458 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
COL2A1P02458 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.05■■□□□ 1.6
COL2A1P02458 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL2A1P02458 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL2A1P02458 AC069236.1-201ENST00000604339 616 ntBASIC25.05■■□□□ 1.6
COL2A1P02458 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.05■■□□□ 1.6
COL2A1P02458 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL2A1P02458 MKRN4P-201ENST00000444706 1521 ntBASIC25.05■■□□□ 1.6
COL2A1P02458 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.05■■□□□ 1.6
COL2A1P02458 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL2A1P02458 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
COL2A1P02458 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.04■■□□□ 1.6
COL2A1P02458 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.04■■□□□ 1.6
COL2A1P02458 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
COL2A1P02458 AC016405.3-201ENST00000607710 860 ntBASIC25.04■■□□□ 1.6
COL2A1P02458 AC092118.2-201ENST00000613495 667 ntBASIC25.04■■□□□ 1.6
COL2A1P02458 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.04■■□□□ 1.6
COL2A1P02458 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL2A1P02458 AC093787.1-201ENST00000450396 207 ntBASIC25.03■■□□□ 1.6
COL2A1P02458 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL2A1P02458 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.03■■□□□ 1.6
COL2A1P02458 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.03■■□□□ 1.6
COL2A1P02458 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL2A1P02458 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.03■■□□□ 1.6
COL2A1P02458 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.03■■□□□ 1.6
COL2A1P02458 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
COL2A1P02458 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL2A1P02458 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.02■■□□□ 1.6
COL2A1P02458 MIR4758-201ENST00000577688 71 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms