Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRNP200O75643 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.45■□□□□ 0.86
SNRNP200O75643 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.45■□□□□ 0.86
SNRNP200O75643 AC138907.5-202ENST00000569484 235 ntBASIC20.45■□□□□ 0.86
SNRNP200O75643 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 UBE2DNL-204ENST00000602536 740 ntBASIC20.45■□□□□ 0.86
SNRNP200O75643 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.45■□□□□ 0.86
SNRNP200O75643 AC079140.4-201ENST00000507448 529 ntBASIC20.45■□□□□ 0.86
SNRNP200O75643 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.45■□□□□ 0.86
SNRNP200O75643 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRNP200O75643 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.44■□□□□ 0.86
SNRNP200O75643 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.44■□□□□ 0.86
SNRNP200O75643 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.44■□□□□ 0.86
SNRNP200O75643 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.44■□□□□ 0.86
SNRNP200O75643 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNRNP200O75643 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNRNP200O75643 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRNP200O75643 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.44■□□□□ 0.86
SNRNP200O75643 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.44■□□□□ 0.86
SNRNP200O75643 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SNRNP200O75643 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNRNP200O75643 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SNRNP200O75643 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.42■□□□□ 0.86
SNRNP200O75643 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SNRNP200O75643 NTF6G-201ENST00000591094 616 ntBASIC20.42■□□□□ 0.86
SNRNP200O75643 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.42■□□□□ 0.86
SNRNP200O75643 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.42■□□□□ 0.86
SNRNP200O75643 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SNRNP200O75643 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 AC090192.1-201ENST00000517740 490 ntBASIC20.42■□□□□ 0.86
SNRNP200O75643 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRNP200O75643 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SNRNP200O75643 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNRNP200O75643 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.41■□□□□ 0.86
SNRNP200O75643 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRNP200O75643 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.41■□□□□ 0.86
SNRNP200O75643 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.41■□□□□ 0.86
SNRNP200O75643 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
SNRNP200O75643 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
SNRNP200O75643 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNRNP200O75643 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.41■□□□□ 0.86
SNRNP200O75643 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.41■□□□□ 0.86
SNRNP200O75643 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.41■□□□□ 0.86
SNRNP200O75643 CNN2P6-201ENST00000439038 900 ntBASIC20.41■□□□□ 0.86
SNRNP200O75643 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.41■□□□□ 0.86
SNRNP200O75643 MFSD11-216ENST00000590393 1141 ntBASIC20.41■□□□□ 0.86
SNRNP200O75643 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
SNRNP200O75643 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SNRNP200O75643 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.4■□□□□ 0.86
SNRNP200O75643 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.4■□□□□ 0.86
SNRNP200O75643 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.4■□□□□ 0.86
SNRNP200O75643 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNRNP200O75643 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNRNP200O75643 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SNRNP200O75643 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.39■□□□□ 0.86
SNRNP200O75643 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.39■□□□□ 0.86
SNRNP200O75643 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNRNP200O75643 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNRNP200O75643 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms