Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.23■□□□□ 0.99
GPC4O75487 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.23■□□□□ 0.99
GPC4O75487 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPC4O75487 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GPC4O75487 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPC4O75487 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.23■□□□□ 0.99
GPC4O75487 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.23■□□□□ 0.99
GPC4O75487 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.23■□□□□ 0.99
GPC4O75487 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.23■□□□□ 0.99
GPC4O75487 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC4O75487 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC4O75487 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GPC4O75487 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GPC4O75487 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC4O75487 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC4O75487 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GPC4O75487 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GPC4O75487 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC4O75487 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC4O75487 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GPC4O75487 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC4O75487 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC4O75487 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 OR7E47P-201ENST00000546390 1422 ntBASIC21.21■□□□□ 0.99
GPC4O75487 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC4O75487 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.21■□□□□ 0.99
GPC4O75487 MIR572-201ENST00000384983 95 ntBASIC21.21■□□□□ 0.99
GPC4O75487 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC4O75487 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
GPC4O75487 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GPC4O75487 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC4O75487 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC4O75487 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
GPC4O75487 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
GPC4O75487 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.2■□□□□ 0.98
GPC4O75487 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
GPC4O75487 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.2■□□□□ 0.98
GPC4O75487 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.2■□□□□ 0.98
GPC4O75487 SMUG1P1-201ENST00000590640 811 ntBASIC21.2■□□□□ 0.98
GPC4O75487 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.2■□□□□ 0.98
GPC4O75487 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC4O75487 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GPC4O75487 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.19■□□□□ 0.98
GPC4O75487 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 AC105265.2-201ENST00000467189 838 ntBASIC21.19■□□□□ 0.98
GPC4O75487 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
GPC4O75487 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC4O75487 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GPC4O75487 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.19■□□□□ 0.98
GPC4O75487 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.19■□□□□ 0.98
GPC4O75487 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
GPC4O75487 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
GPC4O75487 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.18■□□□□ 0.98
GPC4O75487 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC4O75487 AC026310.3-201ENST00000625186 2373 ntBASIC21.18■□□□□ 0.98
GPC4O75487 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC4O75487 FAM99A-202ENST00000538190 1989 ntBASIC21.17■□□□□ 0.98
GPC4O75487 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
GPC4O75487 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC4O75487 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
GPC4O75487 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms