Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
OPHN1O60890 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
OPHN1O60890 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
OPHN1O60890 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
OPHN1O60890 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.14■■□□□ 1.13
OPHN1O60890 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.14■■□□□ 1.13
OPHN1O60890 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.14■■□□□ 1.13
OPHN1O60890 AC087239.1-201ENST00000622671 572 ntBASIC22.14■■□□□ 1.13
OPHN1O60890 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
OPHN1O60890 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.14■■□□□ 1.13
OPHN1O60890 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
OPHN1O60890 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
OPHN1O60890 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.14■■□□□ 1.13
OPHN1O60890 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
OPHN1O60890 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
OPHN1O60890 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
OPHN1O60890 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 CCDC92B-201ENST00000575506 885 ntBASIC22.13■■□□□ 1.13
OPHN1O60890 NTF6G-201ENST00000591094 616 ntBASIC22.13■■□□□ 1.13
OPHN1O60890 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.13■■□□□ 1.13
OPHN1O60890 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
OPHN1O60890 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
OPHN1O60890 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
OPHN1O60890 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
OPHN1O60890 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
OPHN1O60890 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
OPHN1O60890 AC010525.1-201ENST00000585559 441 ntBASIC22.12■■□□□ 1.13
OPHN1O60890 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.12■■□□□ 1.13
OPHN1O60890 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
OPHN1O60890 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
OPHN1O60890 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
OPHN1O60890 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
OPHN1O60890 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.11■■□□□ 1.13
OPHN1O60890 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
OPHN1O60890 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
OPHN1O60890 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
OPHN1O60890 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.1■■□□□ 1.13
OPHN1O60890 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
OPHN1O60890 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.1■■□□□ 1.13
OPHN1O60890 AC010141.3-201ENST00000456659 717 ntBASIC22.1■■□□□ 1.13
OPHN1O60890 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 FBXW4P1-201ENST00000426721 2239 ntBASIC22.1■■□□□ 1.13
OPHN1O60890 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
OPHN1O60890 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
OPHN1O60890 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.09■■□□□ 1.13
OPHN1O60890 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.09■■□□□ 1.13
OPHN1O60890 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
OPHN1O60890 OR7E47P-201ENST00000546390 1422 ntBASIC22.09■■□□□ 1.13
OPHN1O60890 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.09■■□□□ 1.13
OPHN1O60890 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.09■■□□□ 1.13
OPHN1O60890 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.09■■□□□ 1.13
OPHN1O60890 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.09■■□□□ 1.13
OPHN1O60890 KRT18P14-201ENST00000534205 1250 ntBASIC22.09■■□□□ 1.13
OPHN1O60890 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.09■■□□□ 1.13
OPHN1O60890 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.09■■□□□ 1.13
OPHN1O60890 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
OPHN1O60890 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
OPHN1O60890 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
OPHN1O60890 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
OPHN1O60890 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.08■■□□□ 1.13
OPHN1O60890 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
OPHN1O60890 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
OPHN1O60890 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.08■■□□□ 1.13
OPHN1O60890 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.08■■□□□ 1.13
OPHN1O60890 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
OPHN1O60890 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms