Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNT1O60563 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.21■■□□□ 1.47
CCNT1O60563 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.21■■□□□ 1.47
CCNT1O60563 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.21■■□□□ 1.47
CCNT1O60563 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.21■■□□□ 1.47
CCNT1O60563 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCNT1O60563 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
CCNT1O60563 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.21■■□□□ 1.47
CCNT1O60563 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.2■■□□□ 1.47
CCNT1O60563 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.2■■□□□ 1.46
CCNT1O60563 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
CCNT1O60563 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CCNT1O60563 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNT1O60563 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CCNT1O60563 KRT18P14-201ENST00000534205 1250 ntBASIC24.2■■□□□ 1.46
CCNT1O60563 AC087623.3-201ENST00000607047 1098 ntBASIC24.2■■□□□ 1.46
CCNT1O60563 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
CCNT1O60563 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNT1O60563 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.2■■□□□ 1.46
CCNT1O60563 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.2■■□□□ 1.46
CCNT1O60563 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.2■■□□□ 1.46
CCNT1O60563 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNT1O60563 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCNT1O60563 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.19■■□□□ 1.46
CCNT1O60563 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.19■■□□□ 1.46
CCNT1O60563 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.19■■□□□ 1.46
CCNT1O60563 MIR935-201ENST00000401179 91 ntBASIC24.19■■□□□ 1.46
CCNT1O60563 AC079140.4-201ENST00000507448 529 ntBASIC24.19■■□□□ 1.46
CCNT1O60563 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.19■■□□□ 1.46
CCNT1O60563 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.19■■□□□ 1.46
CCNT1O60563 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCNT1O60563 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
CCNT1O60563 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCNT1O60563 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.18■■□□□ 1.46
CCNT1O60563 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
CCNT1O60563 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCNT1O60563 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCNT1O60563 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCNT1O60563 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.18■■□□□ 1.46
CCNT1O60563 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCNT1O60563 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.18■■□□□ 1.46
CCNT1O60563 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCNT1O60563 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CCNT1O60563 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.17■■□□□ 1.46
CCNT1O60563 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CCNT1O60563 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.17■■□□□ 1.46
CCNT1O60563 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCNT1O60563 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
CCNT1O60563 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.17■■□□□ 1.46
CCNT1O60563 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.17■■□□□ 1.46
CCNT1O60563 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.17■■□□□ 1.46
CCNT1O60563 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCNT1O60563 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCNT1O60563 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CCNT1O60563 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L2-201ENST00000561772 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.16■■□□□ 1.46
CCNT1O60563 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L6-201ENST00000626483 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L1-201ENST00000627662 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L8-201ENST00000629013 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L3-201ENST00000630187 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L7-201ENST00000630678 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 DUX4L5-201ENST00000630834 1275 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.16■■□□□ 1.46
CCNT1O60563 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCNT1O60563 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
CCNT1O60563 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.15■■□□□ 1.46
CCNT1O60563 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.15■■□□□ 1.46
CCNT1O60563 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.15■■□□□ 1.46
CCNT1O60563 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.15■■□□□ 1.46
CCNT1O60563 AC104564.3-201ENST00000582367 638 ntBASIC24.15■■□□□ 1.46
CCNT1O60563 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCNT1O60563 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCNT1O60563 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCNT1O60563 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCNT1O60563 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CCNT1O60563 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms