Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.39■□□□□ 0.86
LCMT2O60294 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.39■□□□□ 0.85
LCMT2O60294 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LCMT2O60294 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LCMT2O60294 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCMT2O60294 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCMT2O60294 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCMT2O60294 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
LCMT2O60294 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LCMT2O60294 KRT18P14-201ENST00000534205 1250 ntBASIC20.39■□□□□ 0.85
LCMT2O60294 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.39■□□□□ 0.85
LCMT2O60294 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.39■□□□□ 0.85
LCMT2O60294 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.39■□□□□ 0.85
LCMT2O60294 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.39■□□□□ 0.85
LCMT2O60294 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.39■□□□□ 0.85
LCMT2O60294 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCMT2O60294 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.38■□□□□ 0.85
LCMT2O60294 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.38■□□□□ 0.85
LCMT2O60294 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LCMT2O60294 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 MIR935-201ENST00000401179 91 ntBASIC20.38■□□□□ 0.85
LCMT2O60294 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.38■□□□□ 0.85
LCMT2O60294 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LCMT2O60294 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
LCMT2O60294 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.37■□□□□ 0.85
LCMT2O60294 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
LCMT2O60294 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L2-201ENST00000561772 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.37■□□□□ 0.85
LCMT2O60294 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L6-201ENST00000626483 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L1-201ENST00000627662 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L8-201ENST00000629013 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L3-201ENST00000630187 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L7-201ENST00000630678 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 DUX4L5-201ENST00000630834 1275 ntBASIC20.37■□□□□ 0.85
LCMT2O60294 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.37■□□□□ 0.85
LCMT2O60294 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCMT2O60294 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.36■□□□□ 0.85
LCMT2O60294 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.36■□□□□ 0.85
LCMT2O60294 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCMT2O60294 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.35■□□□□ 0.85
LCMT2O60294 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 AC079140.4-201ENST00000507448 529 ntBASIC20.35■□□□□ 0.85
LCMT2O60294 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.35■□□□□ 0.85
LCMT2O60294 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LCMT2O60294 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.35■□□□□ 0.85
LCMT2O60294 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.35■□□□□ 0.85
LCMT2O60294 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCMT2O60294 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LCMT2O60294 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.34■□□□□ 0.85
LCMT2O60294 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.34■□□□□ 0.85
LCMT2O60294 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.34■□□□□ 0.85
LCMT2O60294 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.34■□□□□ 0.85
LCMT2O60294 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.34■□□□□ 0.85
LCMT2O60294 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.34■□□□□ 0.85
LCMT2O60294 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LCMT2O60294 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.34■□□□□ 0.85
LCMT2O60294 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCMT2O60294 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms