Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
MSH5O43196 AC004854.2-201ENST00000608450 1441 ntBASIC28.49■■■□□ 2.15
MSH5O43196 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
MSH5O43196 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
MSH5O43196 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 ALDH1A3-203ENST00000557963 1670 ntBASIC28.48■■■□□ 2.15
MSH5O43196 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC28.48■■■□□ 2.15
MSH5O43196 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
MSH5O43196 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
MSH5O43196 RN7SKP199-201ENST00000410325 305 ntBASIC28.48■■■□□ 2.15
MSH5O43196 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC28.48■■■□□ 2.15
MSH5O43196 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC28.48■■■□□ 2.15
MSH5O43196 AC090079.2-201ENST00000575289 768 ntBASIC28.48■■■□□ 2.15
MSH5O43196 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC28.48■■■□□ 2.15
MSH5O43196 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.48■■■□□ 2.15
MSH5O43196 AL499627.2-201ENST00000606283 725 ntBASIC28.48■■■□□ 2.15
MSH5O43196 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.48■■■□□ 2.15
MSH5O43196 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.48■■■□□ 2.15
MSH5O43196 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
MSH5O43196 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
MSH5O43196 AP004607.4-201ENST00000530158 1459 ntBASIC28.47■■■□□ 2.15
MSH5O43196 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
MSH5O43196 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
MSH5O43196 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
MSH5O43196 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.47■■■□□ 2.15
MSH5O43196 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
MSH5O43196 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
MSH5O43196 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
MSH5O43196 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
MSH5O43196 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
MSH5O43196 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC28.46■■■□□ 2.15
MSH5O43196 MIR663A-201ENST00000385250 93 ntBASIC28.46■■■□□ 2.15
MSH5O43196 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.46■■■□□ 2.15
MSH5O43196 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
MSH5O43196 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
MSH5O43196 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.46■■■□□ 2.15
MSH5O43196 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
MSH5O43196 AL133445.2-201ENST00000611191 527 ntBASIC28.46■■■□□ 2.15
MSH5O43196 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.46■■■□□ 2.15
MSH5O43196 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
MSH5O43196 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
MSH5O43196 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
MSH5O43196 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
MSH5O43196 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
MSH5O43196 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.45■■■□□ 2.14
MSH5O43196 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.45■■■□□ 2.14
MSH5O43196 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.14
MSH5O43196 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
MSH5O43196 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.44■■■□□ 2.14
MSH5O43196 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
MSH5O43196 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 GPX1P1-201ENST00000388829 606 ntBASIC28.44■■■□□ 2.14
MSH5O43196 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC28.44■■■□□ 2.14
MSH5O43196 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.44■■■□□ 2.14
MSH5O43196 AL136370.1-201ENST00000608166 691 ntBASIC28.44■■■□□ 2.14
MSH5O43196 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
MSH5O43196 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
MSH5O43196 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
MSH5O43196 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC28.43■■■□□ 2.14
MSH5O43196 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
MSH5O43196 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 ELOCP6-201ENST00000429066 328 ntBASIC28.43■■■□□ 2.14
MSH5O43196 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC28.43■■■□□ 2.14
MSH5O43196 ELOCP12-201ENST00000458706 328 ntBASIC28.43■■■□□ 2.14
MSH5O43196 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC28.43■■■□□ 2.14
MSH5O43196 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 WWOX-218ENST00000627394 894 ntTSL 5 BASIC28.43■■■□□ 2.14
MSH5O43196 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
MSH5O43196 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.43■■■□□ 2.14
MSH5O43196 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MSH5O43196 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC28.42■■■□□ 2.14
MSH5O43196 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
MSH5O43196 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
MSH5O43196 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.42■■■□□ 2.14
MSH5O43196 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
MSH5O43196 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
MSH5O43196 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
MSH5O43196 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
MSH5O43196 AL161729.1-201ENST00000604104 1402 ntBASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms