Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.23■□□□□ 0.67
SMAD9O15198 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.23■□□□□ 0.67
SMAD9O15198 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 AC007375.3-201ENST00000600936 2314 ntBASIC19.23■□□□□ 0.67
SMAD9O15198 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SMAD9O15198 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 TPRG1LP1-201ENST00000598702 760 ntBASIC19.23■□□□□ 0.67
SMAD9O15198 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.23■□□□□ 0.67
SMAD9O15198 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD9O15198 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 ECEL1P1-201ENST00000373592 1742 ntBASIC19.22■□□□□ 0.67
SMAD9O15198 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.22■□□□□ 0.67
SMAD9O15198 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD9O15198 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.22■□□□□ 0.67
SMAD9O15198 RARRES2P6-201ENST00000567333 442 ntBASIC19.22■□□□□ 0.67
SMAD9O15198 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
SMAD9O15198 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.22■□□□□ 0.67
SMAD9O15198 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD9O15198 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMAD9O15198 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SMAD9O15198 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.21■□□□□ 0.67
SMAD9O15198 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD9O15198 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.21■□□□□ 0.67
SMAD9O15198 AC123595.1-201ENST00000440769 1046 ntBASIC19.21■□□□□ 0.67
SMAD9O15198 AL034346.1-201ENST00000568244 1277 ntBASIC19.21■□□□□ 0.67
SMAD9O15198 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMAD9O15198 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMAD9O15198 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD9O15198 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.2■□□□□ 0.66
SMAD9O15198 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SMAD9O15198 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.2■□□□□ 0.66
SMAD9O15198 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 AC026271.2-201ENST00000428091 497 ntBASIC19.2■□□□□ 0.66
SMAD9O15198 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMAD9O15198 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 AC092053.2-201ENST00000640557 1818 ntBASIC19.2■□□□□ 0.66
SMAD9O15198 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.2■□□□□ 0.66
SMAD9O15198 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMAD9O15198 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD9O15198 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD9O15198 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMAD9O15198 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMAD9O15198 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD9O15198 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD9O15198 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD9O15198 AC097381.1-201ENST00000429019 1296 ntBASIC19.19■□□□□ 0.66
SMAD9O15198 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD9O15198 MIR6821-201ENST00000617625 74 ntBASIC19.19■□□□□ 0.66
SMAD9O15198 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD9O15198 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SMAD9O15198 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD9O15198 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD9O15198 AL024507.2-201ENST00000606070 2574 ntBASIC19.19■□□□□ 0.66
SMAD9O15198 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD9O15198 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD9O15198 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD9O15198 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms