Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIRPB1O00241 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIRPB1O00241 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.95■□□□□ 0.46
SIRPB1O00241 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.95■□□□□ 0.46
SIRPB1O00241 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.95■□□□□ 0.46
SIRPB1O00241 IGHV3-19-201ENST00000521488 291 ntBASIC17.95■□□□□ 0.46
SIRPB1O00241 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SIRPB1O00241 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
SIRPB1O00241 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIRPB1O00241 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.95■□□□□ 0.46
SIRPB1O00241 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SIRPB1O00241 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIRPB1O00241 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.95■□□□□ 0.46
SIRPB1O00241 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIRPB1O00241 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 AC027682.1-201ENST00000562846 899 ntBASIC17.94■□□□□ 0.46
SIRPB1O00241 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIRPB1O00241 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SIRPB1O00241 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SIRPB1O00241 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIRPB1O00241 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SIRPB1O00241 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.93■□□□□ 0.46
SIRPB1O00241 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.93■□□□□ 0.46
SIRPB1O00241 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.93■□□□□ 0.46
SIRPB1O00241 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 SMUG1P1-201ENST00000590640 811 ntBASIC17.93■□□□□ 0.46
SIRPB1O00241 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.93■□□□□ 0.46
SIRPB1O00241 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.93■□□□□ 0.46
SIRPB1O00241 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.93■□□□□ 0.46
SIRPB1O00241 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SIRPB1O00241 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.93■□□□□ 0.46
SIRPB1O00241 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SIRPB1O00241 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.93■□□□□ 0.46
SIRPB1O00241 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.93■□□□□ 0.46
SIRPB1O00241 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 TSPY26P-201ENST00000476365 1326 ntBASIC17.93■□□□□ 0.46
SIRPB1O00241 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIRPB1O00241 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIRPB1O00241 Z98882.1-201ENST00000622160 2253 ntBASIC17.92■□□□□ 0.46
SIRPB1O00241 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIRPB1O00241 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIRPB1O00241 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.92■□□□□ 0.46
SIRPB1O00241 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SIRPB1O00241 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIRPB1O00241 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIRPB1O00241 AP001330.3-201ENST00000520123 633 ntBASIC17.92■□□□□ 0.46
SIRPB1O00241 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.92■□□□□ 0.46
SIRPB1O00241 AC133561.4-201ENST00000566112 224 ntBASIC17.92■□□□□ 0.46
SIRPB1O00241 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIRPB1O00241 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.92■□□□□ 0.46
SIRPB1O00241 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SIRPB1O00241 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.92■□□□□ 0.46
SIRPB1O00241 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.92■□□□□ 0.46
SIRPB1O00241 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.92■□□□□ 0.46
SIRPB1O00241 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIRPB1O00241 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIRPB1O00241 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.91■□□□□ 0.46
SIRPB1O00241 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIRPB1O00241 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIRPB1O00241 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIRPB1O00241 EDA-201ENST00000338901 1233 ntBASIC17.91■□□□□ 0.46
SIRPB1O00241 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.91■□□□□ 0.46
SIRPB1O00241 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 AF213884.3-201ENST00000563833 479 ntBASIC17.91■□□□□ 0.46
SIRPB1O00241 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.91■□□□□ 0.46
SIRPB1O00241 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms