Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
DDX39AO00148 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX39AO00148 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
DDX39AO00148 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX39AO00148 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
DDX39AO00148 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX39AO00148 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX39AO00148 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX39AO00148 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX39AO00148 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX39AO00148 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX39AO00148 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
DDX39AO00148 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX39AO00148 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX39AO00148 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX39AO00148 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX39AO00148 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
DDX39AO00148 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX39AO00148 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX39AO00148 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX39AO00148 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
DDX39AO00148 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX39AO00148 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.96■■□□□ 1.43
DDX39AO00148 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX39AO00148 FAM99A-202ENST00000538190 1989 ntBASIC23.96■■□□□ 1.43
DDX39AO00148 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX39AO00148 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
DDX39AO00148 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
DDX39AO00148 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
DDX39AO00148 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.95■■□□□ 1.43
DDX39AO00148 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX39AO00148 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
DDX39AO00148 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 UBE2DNL-204ENST00000602536 740 ntBASIC23.95■■□□□ 1.42
DDX39AO00148 AC080038.1-201ENST00000611274 1154 ntBASIC23.95■■□□□ 1.42
DDX39AO00148 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
DDX39AO00148 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX39AO00148 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 AC242852.2-201ENST00000615738 1807 ntBASIC23.95■■□□□ 1.42
DDX39AO00148 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 AC003102.1-202ENST00000563394 1796 ntBASIC23.95■■□□□ 1.42
DDX39AO00148 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX39AO00148 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX39AO00148 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 BID-214ENST00000617586 542 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX39AO00148 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX39AO00148 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX39AO00148 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX39AO00148 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX39AO00148 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX39AO00148 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX39AO00148 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX39AO00148 AC010542.4-201ENST00000563151 1910 ntBASIC23.93■■□□□ 1.42
DDX39AO00148 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX39AO00148 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX39AO00148 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.93■■□□□ 1.42
DDX39AO00148 AC011767.1-201ENST00000617410 1153 ntBASIC23.93■■□□□ 1.42
DDX39AO00148 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX39AO00148 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX39AO00148 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX39AO00148 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX39AO00148 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.92■■□□□ 1.42
DDX39AO00148 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX39AO00148 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX39AO00148 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX39AO00148 EEF1DP3-203ENST00000566025 782 ntBASIC23.92■■□□□ 1.42
DDX39AO00148 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX39AO00148 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX39AO00148 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
DDX39AO00148 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX39AO00148 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX39AO00148 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 AC010141.2-201ENST00000452426 721 ntBASIC23.91■■□□□ 1.42
DDX39AO00148 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX39AO00148 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX39AO00148 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 AC138907.5-202ENST00000569484 235 ntBASIC23.91■■□□□ 1.42
DDX39AO00148 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.91■■□□□ 1.42
DDX39AO00148 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX39AO00148 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms