Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRBV6-4A0A1B0GX49 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRBV6-4A0A1B0GX49 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-4A0A1B0GX49 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-4A0A1B0GX49 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-4A0A1B0GX49 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-4A0A1B0GX49 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC003102.1-202ENST00000563394 1796 ntBASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 RASA4CP-201ENST00000424092 1398 ntBASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC091305.1-201ENST00000479476 895 ntBASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-4A0A1B0GX49 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 TSPY26P-201ENST00000476365 1326 ntBASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 AP001330.3-201ENST00000520123 633 ntBASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC105233.4-201ENST00000642045 216 ntBASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TRBV6-4A0A1B0GX49 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 MIR939-201ENST00000401314 82 ntBASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC110285.6-201ENST00000617652 491 ntBASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRBV6-4A0A1B0GX49 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-4A0A1B0GX49 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 MIR572-201ENST00000384983 95 ntBASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-4A0A1B0GX49 AF213884.3-201ENST00000563833 479 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms