Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV5-4A0A0C4DH59 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 AC097381.1-201ENST00000429019 1296 ntBASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 AC079140.4-201ENST00000507448 529 ntBASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 EEF1DP3-203ENST00000566025 782 ntBASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 MIR6821-201ENST00000617625 74 ntBASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.03■□□□□ 0.96
TRBV5-4A0A0C4DH59 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 KRT18P14-201ENST00000534205 1250 ntBASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV5-4A0A0C4DH59 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 KRT87P-202ENST00000534226 1464 ntBASIC21.01■□□□□ 0.95
TRBV5-4A0A0C4DH59 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC053503.5-201ENST00000601508 636 ntBASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRBV5-4A0A0C4DH59 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC026271.2-201ENST00000428091 497 ntBASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV5-4A0A0C4DH59 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms