Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV4A0A0C4DH28 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV4A0A0C4DH28 FAM99A-202ENST00000538190 1989 ntBASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 AC099791.1-201ENST00000416440 715 ntBASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRGV4A0A0C4DH28 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 AC110285.6-201ENST00000617652 491 ntBASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 AL355001.2-201ENST00000620617 1191 ntBASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV4A0A0C4DH28 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 AP004607.7-201ENST00000527152 1677 ntBASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 IGHV3-19-201ENST00000521488 291 ntBASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV4A0A0C4DH28 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 AL139246.5-201ENST00000606645 996 ntBASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV4A0A0C4DH28 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms