Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 BX005040.4-201ENST00000637145 1518 ntBASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
KDM3AQ9Y4C1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
KDM3AQ9Y4C1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
KDM3AQ9Y4C1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
KDM3AQ9Y4C1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
KDM3AQ9Y4C1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
KDM3AQ9Y4C1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.08■■□□□ 1.45
KDM3AQ9Y4C1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 AC004911.1-201ENST00000416316 871 ntBASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 KRT18P61-201ENST00000585825 1298 ntBASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
KDM3AQ9Y4C1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
KDM3AQ9Y4C1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
KDM3AQ9Y4C1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.05■■□□□ 1.44
KDM3AQ9Y4C1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
KDM3AQ9Y4C1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 AC009237.3-201ENST00000393279 1427 ntBASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
KDM3AQ9Y4C1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 AP006587.3-201ENST00000525742 1516 ntBASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KDM3AQ9Y4C1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms