Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NECTIN3Q9NQS3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 AC079089.2-201ENST00000531211 1277 ntBASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 SMUG1P1-201ENST00000590640 811 ntBASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 AL358852.1-201ENST00000623174 1268 ntBASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NECTIN3Q9NQS3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 AL354811.1-201ENST00000610286 706 ntBASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NECTIN3Q9NQS3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NECTIN3Q9NQS3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NECTIN3Q9NQS3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 RARRES2P6-201ENST00000567333 442 ntBASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NECTIN3Q9NQS3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NECTIN3Q9NQS3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NECTIN3Q9NQS3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NECTIN3Q9NQS3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms