Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
C12orf4Q9NQ89 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
C12orf4Q9NQ89 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 AL020996.1-203ENST00000536896 2307 ntBASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
C12orf4Q9NQ89 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 AC004687.1-201ENST00000579003 1625 ntBASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 AC009102.2-201ENST00000606772 1639 ntBASIC18.38■□□□□ 0.53
C12orf4Q9NQ89 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 KRT125P-201ENST00000546827 989 ntBASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 MTDHP2-201ENST00000601468 714 ntBASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 AC092028.1-203ENST00000608262 953 ntBASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C12orf4Q9NQ89 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C12orf4Q9NQ89 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms