Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SDF2L1Q9HCN8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.6■□□□□ 0.25
SDF2L1Q9HCN8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 BHLHE23-202ENST00000612929 1109 ntBASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDF2L1Q9HCN8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDF2L1Q9HCN8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 ABHD17AP5-201ENST00000580133 923 ntBASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.58■□□□□ 0.24
SDF2L1Q9HCN8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 OXCT2P1-201ENST00000447263 1535 ntBASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 DUX4L18-201ENST00000553347 1267 ntBASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDF2L1Q9HCN8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms