Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRC40Q9H9A6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
LRRC40Q9H9A6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 RASA4CP-201ENST00000424092 1398 ntBASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 TSPY26P-201ENST00000476365 1326 ntBASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 MIR939-201ENST00000401314 82 ntBASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 AF213884.3-201ENST00000563833 479 ntBASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRC40Q9H9A6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.64■■□□□ 1.06
LRRC40Q9H9A6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRRC40Q9H9A6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRRC40Q9H9A6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.64■■□□□ 1.05
LRRC40Q9H9A6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.64■■□□□ 1.05
LRRC40Q9H9A6 AP006587.3-201ENST00000525742 1516 ntBASIC21.64■■□□□ 1.05
LRRC40Q9H9A6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRC40Q9H9A6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 AC091305.1-201ENST00000479476 895 ntBASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRC40Q9H9A6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 AL139246.5-201ENST00000606645 996 ntBASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 AL031432.3-201ENST00000607698 485 ntBASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 Z98882.1-201ENST00000622160 2253 ntBASIC21.62■■□□□ 1.05
LRRC40Q9H9A6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 AC105233.4-201ENST00000642045 216 ntBASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 AC003102.1-202ENST00000563394 1796 ntBASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRC40Q9H9A6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRC40Q9H9A6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms